Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01734 ATGAGACACAGCTTCCATTTTTGGTATGCCTTTCTTCTTATCCTTGTCCTTGGCCGCCACATTTCTTCACTGAAGACTTGTCCAAACTGTGGCACTATCCAAGTTCCATACCCTTTGAGCACAGATTCAACTTGTGGTGATCAAAACTACAAGCTTCGTTGTGATCCCCACTCTCAAAGGCTTTTGTTCGACACCCTCAACGGAAGTTCCTATCTTGTTCTCAGAATCATGTCTTCAAACCAACGCATGGTGGTTCAGCCATCACCTTGGTTACCAGGTTCGTGTGTCACACAAGACATGCCAAGAAGCAATGGTATATGGTTAAATCAATCACTCCCTTTCAACATAACTTCATCCAACACAGTGTTCCTCTTTAACTGTTCCCCTCGCCTCTTGGTTTCTCCACTTAACTGTACTTCTTCTAGTATTTGCCATCGTTATTTGGAGAATTCAGGCCATGTTGACACAAAACTATCATTAGAGTGTGCAAGTGGTCTTCACCCTTGTTGCACTTTTCTAGCTGGAGGGATACCTTCAGCTTACAGGATCCGGCTTCATGATTCTGGTTGCAAAGCATTCAGAAGCATAATTCACTTGAACCAAGACAAGCCTCCGAATCAGTGGGAGGAAGGTCTTGAAATTCAATGGTCTCCTCCACCTGAACCAGTGTGCAAGAATCAAAGGGATTGCTCTGAAGACTCTAAGTGTTCCCCTACTAATAGAAATGGCCTATTTCGATGTCTTTGTAATGGGGGACACGTTTGGAACCCTTTTGAAGCAACCTGTGTGAGGTATGAGAGAAAATCCAAATGGAAAACCAGCTTGGTTGTCTCAATAGGGGTTGTTGTTACTTTTTTCTCCCTTGCTGTGGTTCTTACCATCATCAAAAAGTCCTGCAAACTCTCTAACTATAAAGAGAATCAGGCCAAGGACGAAAGAGAAGAGAAGCTGAAATCAAGTGCTATGGAGAAGCCTTGTAGGATGTTTCAACTGAAAGAGGTGAAGAAAGCAACAAACGGCTTTTCACACGAGAGGTTCTTGGGGAGTGGTGGATTTGGGGAagttttcaaagaacttttgacaTCTCAGAAAGCGATTGACTTCAATCGTGATCAAGATGATGTCAACCTAGCAATTCATGTGAACCAACATGCCAGCAATGGTACAATCATGGAAGTGATGGATCAAAGGCTTCTTATTTCCCTGGAGACTTTGGGGGATAAAATGTTCACAAGCATAAAACTCTTTTTGGAGCTTGCACTTGAATGTCTAAGGGAGAAGAAAGGTGAAAGGCCTAATATGAGGGATATTGTTCAACGCCTACTATGCATAATTAGGATTGTAGAACAAGAGTGA 1356 0.4226 MRHSFHFWYAFLLILVLGRHISSLKTCPNCGTIQVPYPLSTDSTCGDQNYKLRCDPHSQRLLFDTLNGSSYLVLRIMSSNQRMVVQPSPWLPGSCVTQDMPRSNGIWLNQSLPFNITSSNTVFLFNCSPRLLVSPLNCTSSSICHRYLENSGHVDTKLSLECASGLHPCCTFLAGGIPSAYRIRLHDSGCKAFRSIIHLNQDKPPNQWEEGLEIQWSPPPEPVCKNQRDCSEDSKCSPTNRNGLFRCLCNGGHVWNPFEATCVRYERKSKWKTSLVVSIGVVVTFFSLAVVLTIIKKSCKLSNYKENQAKDEREEKLKSSAMEKPCRMFQLKEVKKATNGFSHERFLGSGGFGEVFKELLTSQKAIDFNRDQDDVNLAIHVNQHASNGTIMEVMDQRLLISLETLGDKMFTSIKLFLELALECLREKKGERPNMRDIVQRLLCIIRIVEQE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01734 451 Pfam Wall-associated receptor kinase galacturonan-binding 27 85 IPR025287 GO:0030247
Gma03g01734 451 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 19 357 - -
Gma03g01734 451 Gene3D Phosphorylase Kinase; domain 1 301 398 - -
Gma03g01734 451 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 358 451 - -
Gma03g01734 451 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 358 451 IPR045274 GO:0007166
Gma03g01734 451 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 357 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01734 Gma-Chr3 43451164 43453047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01734 352 451 Receptor kinase-like Gene Family AT5G02070 35.000 2.45e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01734 - - gmx:100783644 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01734 03 43451164 43453047 Gma03g01734 03 43451164 43453047 ECH
Gma19g01784 19 47109771 47111672 Gma03g01734 03 43451164 43453047 GST