Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01656 ATGAAGAAACAATTGACAGGCATACGGGGTGATTCTCCCCTACAATCGGCAATCCGAGTTGGAAATTTAGAATTGGTTCTGGAAATCATCTCTCAGAGTCCAGAGGACGAATTAAAGGAGTTGCTTTCAAAACAAAACAACTCTTTTGAAACTGCCTTATATGTTGCTGCTGAAAATGGTCATCTTGATATACTGAAGGAATTGATTAGATACCATGATATTGGGTTGGCCAGCTTCAAAGCTAGAAATGGATTCGATCCATTCCATATTGCTGCTAAAAATGGACACTTGGAGATAGTGAAGGTCCTCATGGAGGCCTTTCCTGAAATTTCAATGACTGTTGATCTGTCGAACACTACTGGGTTGCATACTGCTGCAGCACAAGGACACATTGAGGTAGTAAATTTTCTCTTGGAAAAAGGTAGTAGCCTGATAACTATTGCTAAAAGCAATGGGAAAACTGTATTGCATTCTGCTGCAAGAAATGGCTACGTGGAGGTCGTCAAGGCCCTTCTGAGCAAAGAACCTGAAATTGCAATGAGAATTGATAAGAAGGGGCAGACAGCACTCCATATGGCGGTTAAAGGACAGAATCTTGAGTTGGTGGATGAACTCGTGAAACTGAATCCATCTTTGGCAAATATGGTGGATGCCAAGGGAAACACTGCACTGCATATAGCAACCCGGAAAGGTCGTCTACAGGTTGTTCAGAAGTTACTAGATTGCAGAGAAATAGACACAGATGTTATTAACAAATCTGGAGAAACTGCTTTGGATACTGCTGAGAAAAATGGTCGCCTGGAAATTGCCAACTTTCTGCAACATCGTGGAGCTCAAAGTGCCAAGTCCATCAAGTCACCGACTACAAACACGGCCCTTGAGCTCAAACGAACAGTGAGTGACATAAAAAGTGGGGTTCATAACCAACTGGAACACACAATTAAAACACAAAGACGTATGCAAGGTATAGCGAAGCGAATCAACAAAATGCACACCGAGGGGCTTAACAATGCGATCAACTCCAACACTGTAGTTGCTGTCCTTATTGCAACAGTTGCTTTTGCTGCCATATTTAATGTCCCGGGCCAGTATCCTGAGAAACAAAATGAACTCTCTCCTGGAATGTCTCCTGGGGAAGCATATATTGCTCCGGATATCGGATTCAAGATATTCATAATCTTTGATTCTACTGCTCTCTTCATATCATTGGCTGTTGTGATTGTCCAAACATCAGTGGTTGTTATTGAGAGGAAAGCAAAGAGACAAATGATGGCAGTTATAAATAAGTTGATGTGGGTAGCATGTGTGCTGATTTCTGTGGCATTTATTGCAATGTCATACATAATTGTTGGGGATCATAAAGAGTTGGCTATAGCAGCCACAGTTCTAGGAACAGTGATTATGGCAGCTACGTTGGGAACACTCTGTTATTGGGTGATTACTCACCACCTTGAGGCCTCAAGATTGCGAAGTCTTAGGACAACAATGAGCAGTAGGCAGTCAATGTCTATGTCAATGATGTCAGGATCGGAGAATGAGTATAAGACAGTGAAAACAAACATTAACTAA 1569 0.4187 MKKQLTGIRGDSPLQSAIRVGNLELVLEIISQSPEDELKELLSKQNNSFETALYVAAENGHLDILKELIRYHDIGLASFKARNGFDPFHIAAKNGHLEIVKVLMEAFPEISMTVDLSNTTGLHTAAAQGHIEVVNFLLEKGSSLITIAKSNGKTVLHSAARNGYVEVVKALLSKEPEIAMRIDKKGQTALHMAVKGQNLELVDELVKLNPSLANMVDAKGNTALHIATRKGRLQVVQKLLDCREIDTDVINKSGETALDTAEKNGRLEIANFLQHRGAQSAKSIKSPTTNTALELKRTVSDIKSGVHNQLEHTIKTQRRMQGIAKRINKMHTEGLNNAINSNTVVAVLIATVAFAAIFNVPGQYPEKQNELSPGMSPGEAYIAPDIGFKIFIIFDSTALFISLAVVIVQTSVVVIERKAKRQMMAVINKLMWVACVLISVAFIAMSYIIVGDHKELAIAATVLGTVIMAATLGTLCYWVITHHLEASRLRSLRTTMSSRQSMSMSMMSGSENEYKTVKTNIN 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01656 522 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Gma19g01656 522 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Gma19g01656 522 Gene3D - 1 146 IPR036770 -
Gma19g01656 522 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Gma19g01656 522 SMART ANK_2a 219 249 IPR002110 GO:0005515
Gma19g01656 522 SMART ANK_2a 117 147 IPR002110 GO:0005515
Gma19g01656 522 SMART ANK_2a 83 112 IPR002110 GO:0005515
Gma19g01656 522 SMART ANK_2a 151 180 IPR002110 GO:0005515
Gma19g01656 522 SMART ANK_2a 185 214 IPR002110 GO:0005515
Gma19g01656 522 SMART ANK_2a 253 282 IPR002110 GO:0005515
Gma19g01656 522 SMART ANK_2a 48 76 IPR002110 GO:0005515
Gma19g01656 522 SMART ANK_2a 9 38 IPR002110 GO:0005515
Gma19g01656 522 SUPERFAMILY Ankyrin repeat 13 278 IPR036770 -
Gma19g01656 522 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Gma19g01656 522 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Gma19g01656 522 Pfam Ankyrin repeats (many copies) 215 261 IPR002110 GO:0005515
Gma19g01656 522 Gene3D - 147 320 IPR036770 -
Gma19g01656 522 ProSiteProfiles Ankyrin repeat region circular profile. 219 241 - -
Gma19g01656 522 ProSiteProfiles Ankyrin repeat region circular profile. 151 178 - -
Gma19g01656 522 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 517 - -
Gma19g01656 522 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Gma19g01656 522 ProSiteProfiles Ankyrin repeat profile. 219 241 IPR002110 GO:0005515
Gma19g01656 522 PANTHER ANKYRIN REPEAT PLANT PROTEIN 1 517 - -
Gma19g01656 522 Pfam Domain of unknown function 333 448 IPR026961 -
Gma19g01656 522 ProSiteProfiles Ankyrin repeat region circular profile. 83 105 - -
Gma19g01656 522 Pfam Ankyrin repeats (3 copies) 122 207 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01656 Gma-Chr19 45937648 45940794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01656 1 509 Miscellaneous Gene Families AT5G60070 63.178 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01656 - - gmx:100787392 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01656 19 45937648 45940794 Gma03g01610 03 42306963 42313240 GST