Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma03g01610 | ATGATGAAGAAACAATTAACAGGTATACGGGGAGATTCTCCCCTGCAATCGGCAATCCGAGCTGGAAATTTAGAATTGGTTCTGGAAATCATCTCTCAGAGTCCAGAGGAAGAATTAAAGGAGTTGCTTTCAAAACAAAACAACTCTTGTGAAACTGCCTTATATGTTGCTGCTGAAAATGGTCATCTTGATATACTCAAGGAATTGATTAGATACCATGATATTGGGTTGGCCAGCTTCAAAGCTAGAAATGGATTTGATGCATTCCACATTGCTGCTAAAAATGGACACTTGGAGATATTGAAAGTCCTCATGGAGGCCTTTCCTGAAATTTCAATGACTGTTGATCTGTCGAACACTACTGTGTTGCATACTGCTGCAGCACAAGGACACATTGAGGTAGTAAATTTTCTCTTGGAAAAAGGTAATAGCCTGGTAACTATTGCAAAAAGCAATGGGAAAACTGTGTTGCATTCTTCTGCAAGAAATGGCTACTTGGAGGTTGTCAAGGCCCTTGTGAGCAAAGAACCAGAAATTGCAATGAGAATTGATAAAAAGGGGCAGACAGCACTCCATATGGCAGTTAAAGGACAGAATCTTGAGTTGGTGGATGAGCTCGTGAAATTGAATCCATCTTTGGCCAATATGGTGGATGCCAAGGGGAACACTGCACTGCATATAGCAACCCGGAAGGGTCGTCTACAGGTTGTTCAGAAGTTACTAGATTGCAGAGAAATAAACACAGATGTTATCAACAAATCTGGAGAAACTGCTTTAGATACTGCAGAGAAAAATGGTCGTTTGGAAATTGCCAACTTTCTGCAACATCATGGAGCTCAAAGTGCCAAGTCCATCAAGTCACCTACTACAAACACGGCCCTTGAGCTCAAACAAACAGTGAGTGACATAAAAAGTGAGGTTCATAACCAGCTGGAACACACAATTAAAACGCAAAGACGTATGCAAGGTATAGCGAAGCGAATCAACAAAATGCACACTGAGGGGCTTAACAATGCGATCAACTCCAACATTGTTGTTGCTGTCCTTATTGCAACAGTTGCTTTTGCTGCCATATTTAATGTCCCGGGCCAGTATCCTGAGAAACCAAGTGAACTCTCTCCTGGAATGTCTCCTGGGGAAGCATATATTGCTCCAGATATTGGATTCATGATATTCATAATCTTTGATTCTACTGCCCTCTTCATATCATTGGCTGTTGTGATTGTCCAAACATCAGTGGTTGTTATTGAGAGGAAAGCAAAGAGACAAATGATGGCAGTTATAAATAAGTTGATGTGGGTTGCATGTGTGCTGATTTCTGTGGCATTTATTGCAATGTCATACATAATTGTTGGGGATCATAAAGAGTTGGCTATAGCAGCCACAGCTCTAGGAACAGTGATTATGGCAGCTACTTTAGGAACACTCTGTTATTGGGTGATTGCTCATCGCCTTGAGGCCTCAAGATTGCGAAGTCTTAGGACAACAATGAGCAGTAGGCAGTCAATGTCTATGTCAATGATGTCAGGATCAGAGAATGAGTATAAGACAGTAAGAGAACGAAGAGATCACGGCCCCTACCAAAAAAGAAAAAGGAAGAGAGTGAAGTCGATCTACTTCAGCCTTTTAGTCATATCAAATGAAATTTTTATTATTATGATTCATTAG | 1668 | 0.4089 | MMKKQLTGIRGDSPLQSAIRAGNLELVLEIISQSPEEELKELLSKQNNSCETALYVAAENGHLDILKELIRYHDIGLASFKARNGFDAFHIAAKNGHLEILKVLMEAFPEISMTVDLSNTTVLHTAAAQGHIEVVNFLLEKGNSLVTIAKSNGKTVLHSSARNGYLEVVKALVSKEPEIAMRIDKKGQTALHMAVKGQNLELVDELVKLNPSLANMVDAKGNTALHIATRKGRLQVVQKLLDCREINTDVINKSGETALDTAEKNGRLEIANFLQHHGAQSAKSIKSPTTNTALELKQTVSDIKSEVHNQLEHTIKTQRRMQGIAKRINKMHTEGLNNAINSNIVVAVLIATVAFAAIFNVPGQYPEKPSELSPGMSPGEAYIAPDIGFMIFIIFDSTALFISLAVVIVQTSVVVIERKAKRQMMAVINKLMWVACVLISVAFIAMSYIIVGDHKELAIAATALGTVIMAATLGTLCYWVIAHRLEASRLRSLRTTMSSRQSMSMSMMSGSENEYKTVRERRDHGPYQKRKRKRVKSIYFSLLVISNEIFIIMIH | 555 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma03g01610 | 555 | Gene3D | - | 2 | 108 | IPR036770 | - | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat profile. | 220 | 242 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat region circular profile. | 84 | 106 | - | - | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat profile. | 152 | 184 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat region circular profile. | 118 | 145 | - | - | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat profile. | 84 | 116 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat region circular profile. | 220 | 242 | - | - | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat region circular profile. | 152 | 179 | - | - | |
| Gma03g01610 | 555 | Gene3D | - | 109 | 280 | IPR036770 | - | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat profile. | 186 | 208 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | Pfam | Domain of unknown function | 334 | 449 | IPR026961 | - | |
| Gma03g01610 | 555 | PANTHER | ANKYRIN REPEAT PLANT PROTEIN | 1 | 518 | - | - | |
| Gma03g01610 | 555 | SMART | ANK_2a | 10 | 41 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | SMART | ANK_2a | 220 | 250 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | SMART | ANK_2a | 49 | 77 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | SMART | ANK_2a | 118 | 148 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | SMART | ANK_2a | 186 | 215 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | SMART | ANK_2a | 152 | 181 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | SMART | ANK_2a | 84 | 113 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | SMART | ANK_2a | 254 | 283 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | SUPERFAMILY | Ankyrin repeat | 14 | 279 | IPR036770 | - | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat region circular profile. | 186 | 208 | - | - | |
| Gma03g01610 | 555 | PANTHER | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT | 1 | 518 | - | - | |
| Gma03g01610 | 555 | ProSiteProfiles | Ankyrin repeat profile. | 118 | 150 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | Pfam | Ankyrin repeats (3 copies) | 81 | 143 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | Pfam | Ankyrin repeats (3 copies) | 150 | 208 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | Pfam | Ankyrin repeats (3 copies) | 217 | 280 | IPR002110 | GO:0005515 | |
| Gma03g01610 | 555 | Pfam | Ankyrin repeats (3 copies) | 10 | 75 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma03g01610 | Gma-Chr3 | 42306963 | 42313240 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma03g01610 | 2 | 511 | Miscellaneous Gene Families | AT1G07710 | 64.775 | 0.0 | 615 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma03g01610 | - | - | gmx:100802370 | 939.102 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma19g01656 | 19 | 45937648 | 45940794 | Gma03g01610 | 03 | 42306963 | 42313240 | GST |