Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01593 ATGATGCTAAGAAGCTCTTCAACACCAGTTCTTGGATCCCTCCTCTCATCCTTCCCAGATAGTCCTAACAACAATATTCACTCAGAAACCTGTCATGCACTTAAACACTTTCCACCAACCAGTGTCCCACAACCTTATCACAAACTTACTTGCCACCAAACCCGGTCCTTTGCATGTGGTTCTTCTCCAATCTCTCCCTCAATTGGTGAGCTTGAAAGGCAAAACAAAGGCTTTAGAAGAGTCCAATCTGATGGGAACTTGCAAGACTTGGCCTACTTTTCTTGCAACAATGAAGAAAGGTTGGAGTATTTAGACCCTTCCAAGAGGTTTTCAGCTAGACACAGGAGCTTGGTGCTGGAGACAATTCCTTCTTACTCTACTGCTAAGCACAATGGCTTGAGTGAAGAAGAGGAAGATGAAGAAATGGAAAGTGAGAGTGAAGATGGGTTCAGTGTGGTGAATGGTGGAAAGGATGTGATATTCAGTGAAGAGGTGAGAGTGAAGAATGGAGTTTGTAGGGTGAGTTTTGGTGACCAGGAAGAGGTTGGTAGTGGTAAAGAAATGTATCTTGCAAAGGGACTTGGTGTGGAGTGTTGTGGCGATGGCATAGGTGGTTGTAGAGGCGGCGGTGGTGGTGATCATAATCCCTTGGGTTCTGGAGGAAATGATGGAGATAGGCATGCAGTGGAAGAATATTACAAGAAAATGGTTAAGGAAAATCCTGGGGATCCATTGTTTCTGAGGAATTATGCTAATTTTTTGTATCAGTACAAACAAGACTGTGAAGGAGCAGAGGAGTATTATTCCCGCGCCATACTTGCAGACCCGGATGACGGAGAAGTTCTATCACAGTATGGGAAGTTAGTTTGGGAGCTACATCATGACCAAGAACGTGCCTCCAGCTATTTTGAAAGAGCAGTCCAAGCCTCTCCTGAAGACAGCCATGTACAAGCAGCATATGCTAGTTTCCTTTGGGACACGGAGGAAGACGAGGATGGTAGCAACGAACCACAATGTTTGCCGCCACATTCTCTTCAAGGAGCTATAGCTACTGCAGGTGCTTGA 1065 0.4526 MMLRSSSTPVLGSLLSSFPDSPNNNIHSETCHALKHFPPTSVPQPYHKLTCHQTRSFACGSSPISPSIGELERQNKGFRRVQSDGNLQDLAYFSCNNEERLEYLDPSKRFSARHRSLVLETIPSYSTAKHNGLSEEEEDEEMESESEDGFSVVNGGKDVIFSEEVRVKNGVCRVSFGDQEEVGSGKEMYLAKGLGVECCGDGIGGCRGGGGGDHNPLGSGGNDGDRHAVEEYYKKMVKENPGDPLFLRNYANFLYQYKQDCEGAEEYYSRAILADPDDGEVLSQYGKLVWELHHDQERASSYFERAVQASPEDSHVQAAYASFLWDTEEDEDGSNEPQCLPPHSLQGAIATAGA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01593 354 SMART hat_new_1 294 326 IPR003107 GO:0006396
Gma19g01593 354 SMART hat_new_1 224 256 IPR003107 GO:0006396
Gma19g01593 354 SMART hat_new_1 259 291 IPR003107 GO:0006396
Gma19g01593 354 MobiDBLite consensus disorder prediction 127 150 - -
Gma19g01593 354 PANTHER OSJNBA0004N05.2 PROTEIN 1 338 - -
Gma19g01593 354 Gene3D Tetratricopeptide repeat domain 222 334 IPR011990 GO:0005515
Gma19g01593 354 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 338 - -
Gma19g01593 354 MobiDBLite consensus disorder prediction 328 354 - -
Gma19g01593 354 SUPERFAMILY TPR-like 227 332 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01593 Gma-Chr19 45310832 45313730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01593 - - gmx:100812713 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01593 19 45310832 45313730 Gma19g01593 19 45310832 45313730 ECH
Gma19g01593 19 45310832 45313730 Gma03g01539 03 41638760 41642077 GST