Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01539 ATGATGCTAAGAAGCTCTTCAACACCAGTTCTTGGATCCCTCCTCTCTTCCTTCACAGATAGCCCTAACAACAATATTCACTCAGAAACCTGTCATGCACTGAAACACTTTCCACCAACCACTGTCCCACAACATTATCACAAACTTACTTTCCACCAAACTGGGTCCTCTGCATGTGGTTCTTCTCCAATCTCTCCCTCAATTGGTGAGCTTGAAAGGCAAAACAAAGGCTTGATCAGAAGAGTCCAATCTGATGGGAACTTGCAAGACTTGGCCTTCTTTTCTTGCAACAATGAAGAAAGGTTTGAGTTTTCAGACCCTTCCAAGAGGTTTTCAGCTAGACACAGGAGCTTGGTGCTGGAGACCATTCCTTCTTTCTCTACTGCCAAGCACAATGGCTTGAGTGAAGAAGAGGAAGATGAAGAAATGGAAAGTGAGAGTGAAGATGGGTTCAGTGTGCTGAATGGTGGGAAGGGTGTAATATTCAGTGAAGAAGTGAGGGTGAAGGATGGAGTTTGTAGGGTGAGTTTTGGTGACCAGGAAGAGGTTAGTAGTGGTAAAGAAATGTATCTTGCAAAGGGACTTGGTGTAGAGTGCTGTGGTGATGGCATaggtggttgtagaggtggtggtggaggtggtggtgATCATAATCCCTTGGGTTCTGGAGGAAATGATGGAGAAAGGCATGGAGTGGAAGAATATTACAAGAAAATGGTTAGGGAAAATCCTGGGGATCCTTTGTTTCTGAGGAATTATGCCAATTTTTTGTATCAGTGCAAACAAGACCGTGAAGGAGCAGAGGAGTATTATTCCCGTGCCATACTTGCAGACCCAAATGATGGAGAGGTTCTATCACAGTATGGGAAGTTAGTTTGGGAACTACATCACAACCAAGAACGTGCCTCCAGCTATTTTGAAAGAGCAGTCCAAGCCTCTCCTGAAGACAGCCATGTACAAGCAGCATATGCTAGTTTCCTTTGGGACACAGAGGAAGACGAGGATGGTATCAATGAACCACAAAGTTTACCGCCACATTCTCATCAAGGAGCTGTGGCTACTGCAGGTGCTTGA 1074 0.432 MMLRSSSTPVLGSLLSSFTDSPNNNIHSETCHALKHFPPTTVPQHYHKLTFHQTGSSACGSSPISPSIGELERQNKGLIRRVQSDGNLQDLAFFSCNNEERFEFSDPSKRFSARHRSLVLETIPSFSTAKHNGLSEEEEDEEMESESEDGFSVLNGGKGVIFSEEVRVKDGVCRVSFGDQEEVSSGKEMYLAKGLGVECCGDGIGGCRGGGGGGGDHNPLGSGGNDGERHGVEEYYKKMVRENPGDPLFLRNYANFLYQCKQDREGAEEYYSRAILADPNDGEVLSQYGKLVWELHHNQERASSYFERAVQASPEDSHVQAAYASFLWDTEEDEDGINEPQSLPPHSHQGAVATAGA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01539 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 341 - -
Gma03g01539 357 PANTHER OSJNBA0004N05.2 PROTEIN 1 341 - -
Gma03g01539 357 SUPERFAMILY TPR-like 233 337 IPR011990 GO:0005515
Gma03g01539 357 SMART hat_new_1 297 329 IPR003107 GO:0006396
Gma03g01539 357 SMART hat_new_1 227 259 IPR003107 GO:0006396
Gma03g01539 357 SMART hat_new_1 262 294 IPR003107 GO:0006396
Gma03g01539 357 MobiDBLite consensus disorder prediction 333 357 - -
Gma03g01539 357 Gene3D Tetratricopeptide repeat domain 225 338 IPR011990 GO:0005515
Gma03g01539 357 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01539 Gma-Chr3 41638760 41642077 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01539 - - gmx:100788436 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01539 03 41638760 41642077 Gma03g01539 03 41638760 41642077 ECH
Gma19g01593 19 45310832 45313730 Gma03g01539 03 41638760 41642077 GST