Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01592 ATGGGTGTGGTGGATGCAACCTGTGCAGATTGTAATACAGGGCCAGAGTCATTAGTTCATGCAAACCGTGATTGTACAAAGTCTGCTGAAGTTTGGCGCTTTGCTTGGGGAAGCACAAGTCTACCTTCTTTTGTGGGGGGTTTTCGCGCGCTCTCCCTTCCTTCTCCTGGATCTGCTAGGAGAAGCGCTGAATGCTCTGAGCTTCAACGCTGTTTGTTAGAGATGGCGTCTTCGTATCCCGGTTCCGTTAGTGCCGCACAGGTTGGTTCCTACTTCGTGGGACAGTACTACCAGATTCTTCGCCAGCAACCGAATCTCGTTCACCAGTTCTACTCCGATTCCAGCAGCATGATTCGCGTTGACGGAGACTCCGTTGAAACCGCGCACGATGTGTTGCAAATTCATTCAATTGTCTCGTTACTGAATTTTACTACAATTGAGATCAAGACAATCAATTCTCTTGACTCTTGGGATGGAGGTGTGCTTGTGATGGCCTCAGGTTTTGTGAAGATAAAGGATATCGGTGGGAAGCGGAAGTTTGTTCAAACTTTCTTTCTTGCTCCTCAGGAGAAGGGTTACTTTGTAATGAATGATATGTTTCATTTCATTGATGATGGAGTAATGTACCCAAATCTGGTACCAGTGGCATCCGAAACGATTGACACACAACCACATCTTTCTGCTTCTCTTGCTGAGCCACCAGTTTCAGACTATGGCTTAGAGGAAGAAGCCAGGGAATATGCCAACTCAGTTCATATAGATGATGATCCAGTGGACAAGTATAGTCTTCCTGAGCACCAGCAGCAGCTACAAGAAGAACTTGAAACCGAAATTGTGGTGGAGGAAACTTCCGTACAGGAGGCATCTCCACCAATTCATACCGTTGCACACACTATCCAAGAACCCCCTGTTGCTCTTGTGGAAGAGTCCTTTGAGGAGCCTCCTAAGAAAACATATGCATCTATTTTACGAGTTTCCAAAGGGCTGCCAGTGTTGTCAGCTGCTCCAAAGCATGCTCCACATTCTTTCAAAAGTGCTCCACCTCCTCCAGAGTTGAACCATGTAGCACAGCCTGCTGTTCAGCAGTCAAGCTCTGCATCTATGTATGCTCCCGAGTCAGGGACCGAGGCAGCAGAAGAAGGCTATGGACTAGAAGAAGATGAAGTAACATCTGTCTATGTTAGAAACTTGCCTGCTAATGTTACTGAAGTGGAGATTGACCAAGAATTTAAGAATTTTGGCAGAATTAAGCCAGATGGAATATTCATTAGGGTCCGAAAGGAAATTGGAGTCTGCTATGCATTTGTTGAATTTGAAGACATTATTGGTGTTCAAAATGCACTTCAGTCTTCTCCACTCCAATTGGCTGGAAGACAAGTATACATAGAGGAGCGGAGGCCAAACAGTGTCGGTGCAGCTCGGGGAGGAAGAAGGGGAAGAGGCAGAGGCAGCTATCAAGCAGATGCTCCGAGAGGGCGTTTTGGTGGTAGGAGCATGGGAAGGGGAGGTTATCAGGATGGTTCAGACTACACCAGACTAAGAGGTGATGGTTATCTTCAGCGTGGTTCACGATGA 1575 0.4673 MGVVDATCADCNTGPESLVHANRDCTKSAEVWRFAWGSTSLPSFVGGFRALSLPSPGSARRSAECSELQRCLLEMASSYPGSVSAAQVGSYFVGQYYQILRQQPNLVHQFYSDSSSMIRVDGDSVETAHDVLQIHSIVSLLNFTTIEIKTINSLDSWDGGVLVMASGFVKIKDIGGKRKFVQTFFLAPQEKGYFVMNDMFHFIDDGVMYPNLVPVASETIDTQPHLSASLAEPPVSDYGLEEEAREYANSVHIDDDPVDKYSLPEHQQQLQEELETEIVVEETSVQEASPPIHTVAHTIQEPPVALVEESFEEPPKKTYASILRVSKGLPVLSAAPKHAPHSFKSAPPPPELNHVAQPAVQQSSSASMYAPESGTEAAEEGYGLEEDEVTSVYVRNLPANVTEVEIDQEFKNFGRIKPDGIFIRVRKEIGVCYAFVEFEDIIGVQNALQSSPLQLAGRQVYIEERRPNSVGAARGGRRGRGRGSYQADAPRGRFGGRSMGRGGYQDGSDYTRLRGDGYLQRGSR 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01592 524 Pfam Nuclear transport factor 2 (NTF2) domain 88 202 IPR002075 -
Gma19g01592 524 CDD NTF2 84 204 IPR018222 -
Gma19g01592 524 ProSiteProfiles Nuclear transport factor 2 domain profile. 88 202 IPR018222 -
Gma19g01592 524 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 390 467 IPR000504 GO:0003723
Gma19g01592 524 MobiDBLite consensus disorder prediction 356 371 - -
Gma19g01592 524 Gene3D - 361 513 IPR012677 -
Gma19g01592 524 SUPERFAMILY RNA-binding domain, RBD 385 497 IPR035979 GO:0003676
Gma19g01592 524 MobiDBLite consensus disorder prediction 467 524 - -
Gma19g01592 524 MobiDBLite consensus disorder prediction 336 382 - -
Gma19g01592 524 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 392 450 IPR000504 GO:0003723
Gma19g01592 524 Gene3D - 79 206 - -
Gma19g01592 524 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 83 518 IPR039539 -
Gma19g01592 524 SMART rrm1_1 391 463 IPR000504 GO:0003723
Gma19g01592 524 PANTHER GB|AAD20086.1 83 518 - -
Gma19g01592 524 SUPERFAMILY NTF2-like 84 205 IPR032710 -
Gma19g01592 524 CDD RRM_SF 392 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01592 Gma-Chr19 45302038 45309633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01592 - - gmx:100812165 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01592 19 45302038 45309633 Gma19g01592 19 45302038 45309633 ECH
Gma19g01592 19 45302038 45309633 Gma03g01538 03 41631288 41637898 GST