Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01591 ATGGGTATACTAAAAGTAAAACACCACATTCCCACGCTCCTCTTTCTCAGTATTTCATTTCCTCTGTTTCTTCTTACACCTACCTCCTCAGACAACACAAACTTGATCTACAAAGGTTGCGCCGACCAGAAACTCCAAGCCCAATACTCCCAGAACCTCAAACCGCTGTTGGACTCCCTAGTCTCGGCGTCGGCACAGAAGGGTTTCGCCGCGACTACCCAAAACGCGCTCACCGGCGCGTACCAATGCAGGGGAGACCTCTCCAACTCCGACTGCTACACCTGCGTGAGCAAGATTCCGGGGATGGTGAAGCGCCTCTGCGGCGGAGATGACGTGGCGGCGGCGCGGGTCCAGCTGAGCGGGTGCTACCTGCGGTACGAGGTGGTCGGGTTCAAGGTGGTCTCCGCGACGCAGCTGCTGTACAAGGTGTGCGGGGCCCGCAAGGTGGTCGACGGCGGGGGGTTCGAGGCGAGGAGGGACGCGGCGTTTGGGATGGCGGAGAACGGCGTGCAGAGCAGCGGAAATTTGTTCTACACGGGGAGCTACCAGAGTCTCTATGTGTTGGGACAGTGCGAGGGTAGTTTGGGAAATGAGGATTGTGGAGGTTGTATCAAGAGTGGTGCGGAACAGGCTAGGGATCAGTGTGGTGACTCTATCTCAGCGCAGGTTTATCTCCAGAGTTGTTTTCTTAGTTATAGCTTTTACCCCAATGGTGTTCCCACCGCCTCATCGTCTTCCTCAGGGGGAGGAGGGGGGCATCCACACACTGAGAGGACAGTGGCACTTGCGGTGGGAGGGGTGGCGGCTCTTGGATTCTTGATTGTTTGCTTGTTATTTCTCAAGTCGGTGTTGAAGAGAAGAGGTGATGATGTTGGCCATGGTGATTCTGAATGTGGGTGGGATGCGTGTGATCTCATGATGCTCAAAACTAGATTGGCACTCAGATTTGGACTGGAGTGGTGCAGTGGTGGAGTTGTTTGGGGTGAGAAAATGGTTTATGAGCTGAGAGGGGAAGGGGAGGGGTGTGGGAAAGGGTACTCGAGTAATTTCCAACGTTTTGGTAGTGCGAATATCAACTCTCATCCAAGATTCCAATTCCAATTCTCGATTTACCACCAAAAACAGCCACCTGAGGTTTCAATTTCTCTGAGAAATAAAGAGAGCTCCTATCTCTTCTCTGCGACGACGCCGTTTCTCTCCCTTGAGGTAAAGGCCTTTTATTCAAGCATGGGAGATAGCGAACCGGTGGTCACTGAAGCATCTGCTGCTGAGGCATATGCTTCGGCTGGTTATGCTGAGACTGGGTCAAATCCTACTCCCGAGGCAGGTGCTGCTGTTGATCAATCCGCTGGAGAAGCTGCTCAGGCCAGCTCAACTTACGGATATGGTTATTCTAATGTTGGTGACACGAATGCGTATGCTGGAGATCCGAATTCCGTCCTACAGCAAGCTCATTTCAGTGCAACTGGTGATTCCAAGCCAGCTGGTGCAGCGGCTGATGCTAACGAGGCCTCTGCTGGGGTTGGAACCACAGCCGCCGAGTCTACTATGGTTTCCGACTACAACTCGTCCGTAAATGGCGGTGTTGTTGGTGCAGTGGCAAATGCCGTGGGACTTGAAAACGGGAATGCGTTGGAGAATGCTGATGGGTCGGCTGATGAGAAACAGCTTGCAGATGGTTATGCTGCCTTGTCTGCTGAAGAAGACCGACTGTGGAATATTGTAAGAGCTAATTCTTTAGATTTCACTGCCTGGACTTCCTTGATTGAAGAGACAGAGAAGACAGAGGACAATATTTTGAAGATTCGAAGAGTCTATGATGCTTTTCTAGCAGAATTCCCCTTGTGCTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGTCTTGGCTCTATCGATAAAGTTGTTGAAGTGTATGAGCGTGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACATATGGGGATCCAAACACTGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCCCTCTGGGATAAATACATTGAATATGAGTACATGCAGCAGGACTGGGCCTGCCTTGCTGTGATCTACACCAGAATATTAGAGAATCCAAATCAACAATTAGATCGGTATTTCAGCAGCTTCAAAGAGTTAGCTGGAAATCGTCCTTTATCAGATATACGAACTGCTGATGAAGCTGCTGCAGTGGCAGGAGTTGCTTCAGAGGCTACTGGCCAAGCTACTGAGGGAGAAGTTCATCCTGATGGTGCAGAGCGTTCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCATGTACGGCCCCTCAATGTTGGAGAGCTTGAGAATTGGCATAACTATTTGGACTTTATAGAAAGGGAAGGGGACTTGAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCATGCGCCAATTATCCGGAGTATTGGATACGCTATGTTTTGTGTATGGAAGCCAGCGGAAGCATGGATCTTGCAAATAATGTTCTTGCTCGAGCAACCCAAGTCTTTGTTAAGAGACAACCAGAGATACATCTTTTTTGTGCTCGGTTCAAGGAGCAGACTGGAGATATAGATGGTGCTAGAGCTGCGTATCAACTTGTGCATACTGAAACTTCTCCTGGTCTTCTTGAAGCAATTATCAAACATGCCAATATGGAATACCGACTGGGAAAAATGGAAGATGCCTTCTCTTTGTATGAACATGCCATTGCTATTGAGAAAGGAAAAGAACATTCACAAACATTGCCGATGTtgtttgctcaatattctcgatttgtatatttgGCTTCTGGGAATGCAGAGAAGGCAAGGCAGATTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTCGACTTTTTGGAGTCATGGGTTGTCAAATTCATAATGCCTAACTCAGAGAGTGCTGGTGTAGCAAGTCCAACAGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTAAATCTCTTTGGTGATGTTCAATCTATCAAGAGAGCTGAAGATAGGCATGCCAAATTGTTTTTGCCTCACAGAAGCATGTCAGAGTTGAAAAAACGTCATGCTGAGGATTTCTTAGTTTCGGACAAAACAAAAGTGCCAAGATCGTATTCTGCTCAGTCACCTGCGCAATCTGCGATGGGTGCATATCCAAATGCGCAGAACCAGTGGACTAATTATGGAGTTCAACCTCAAACTTGGCCTCCAGTTACTCAAGCTCAAGGGCAACAATGGACTGCTGGCTACACCCAGCAGGCTTCCTACGGGGCTTATGCTGGATATGGGAGCAACTATGTAAATTCGCAATTGCCTACATCAGTTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCTGCACAGCAACCTTCTGCGGTTCCTCAAGCCTATTACGGGAGTTATTATTGA 3714 0.475 MGILKVKHHIPTLLFLSISFPLFLLTPTSSDNTNLIYKGCADQKLQAQYSQNLKPLLDSLVSASAQKGFAATTQNALTGAYQCRGDLSNSDCYTCVSKIPGMVKRLCGGDDVAAARVQLSGCYLRYEVVGFKVVSATQLLYKVCGARKVVDGGGFEARRDAAFGMAENGVQSSGNLFYTGSYQSLYVLGQCEGSLGNEDCGGCIKSGAEQARDQCGDSISAQVYLQSCFLSYSFYPNGVPTASSSSSGGGGGHPHTERTVALAVGGVAALGFLIVCLLFLKSVLKRRGDDVGHGDSECGWDACDLMMLKTRLALRFGLEWCSGGVVWGEKMVYELRGEGEGCGKGYSSNFQRFGSANINSHPRFQFQFSIYHQKQPPEVSISLRNKESSYLFSATTPFLSLEVKAFYSSMGDSEPVVTEASAAEAYASAGYAETGSNPTPEAGAAVDQSAGEAAQASSTYGYGYSNVGDTNAYAGDPNSVLQQAHFSATGDSKPAGAAADANEASAGVGTTAAESTMVSDYNSSVNGGVVGAVANAVGLENGNALENADGSADEKQLADGYAALSAEEDRLWNIVRANSLDFTAWTSLIEETEKTEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPNTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWACLAVIYTRILENPNQQLDRYFSSFKELAGNRPLSDIRTADEAAAVAGVASEATGQATEGEVHPDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHLFCARFKEQTGDIDGARAAYQLVHTETSPGLLEAIIKHANMEYRLGKMEDAFSLYEHAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPLLEALLHFEAIQPLPKRVGVDFLESWVVKFIMPNSESAGVASPTEREELSSIFLEFLNLFGDVQSIKRAEDRHAKLFLPHRSMSELKKRHAEDFLVSDKTKVPRSYSAQSPAQSAMGAYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGSNYVNSQLPTSVPQSTAYGAYPPAYPAQPAVPQQNYAQPVAAAAPAQQPSAVPQAYYGSYY 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01591 1237 PANTHER PRE-MRNA-PROCESSING FACTOR 39 495 1221 - -
Gma19g01591 1237 Gene3D Tetratricopeptide repeat domain 826 1129 IPR011990 GO:0005515
Gma19g01591 1237 Gene3D Tetratricopeptide repeat domain 573 738 IPR011990 GO:0005515
Gma19g01591 1237 SUPERFAMILY TPR-like 790 1093 IPR011990 GO:0005515
Gma19g01591 1237 MobiDBLite consensus disorder prediction 758 780 - -
Gma19g01591 1237 SMART hat_new_1 597 629 IPR003107 GO:0006396
Gma19g01591 1237 SMART hat_new_1 846 878 IPR003107 GO:0006396
Gma19g01591 1237 SMART hat_new_1 991 1023 IPR003107 GO:0006396
Gma19g01591 1237 SMART hat_new_1 666 701 IPR003107 GO:0006396
Gma19g01591 1237 SMART hat_new_1 631 663 IPR003107 GO:0006396
Gma19g01591 1237 Pfam Salt stress response/antifungal 44 127 IPR002902 -
Gma19g01591 1237 Pfam Salt stress response/antifungal 175 234 IPR002902 -
Gma19g01591 1237 SUPERFAMILY TPR-like 575 733 IPR011990 GO:0005515
Gma19g01591 1237 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 495 1221 - -
Gma19g01591 1237 ProSiteProfiles Gnk2-homologous domain profile. 31 131 IPR002902 -
Gma19g01591 1237 ProSiteProfiles Gnk2-homologous domain profile. 137 237 IPR002902 -
Gma19g01591 1237 Gene3D - 32 131 IPR038408 -
Gma19g01591 1237 Gene3D - 135 236 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01591 Gma-Chr19 45284415 45299289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01591 12 233 Receptor kinase-like Gene Family AT5G40380 27.801 2.21e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01591 K13217 - gmx:100810738 1509.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01591 19 45284415 45299289 Gma19g01591 19 45284415 45299289 ECH
Gma19g01591 19 45284415 45299289 Gma03g01537 03 41614446 41624854 GST