Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01537 ATGGGAGATAGCGAAGCGGTGGTTACGGAAGCATCTGCTGCTGAGGCATATGCTTCGGCTGGTTATGCTGAGACCGGGTCGAATCCTGCTCCCGAGGCAGGTGCTACTGTTGATCAATCTGCTGGAGAAGCTGCTCAGGCCAGTTCAACTTATGGTTATGGTTATTCTAATGTTGGTGACGTGAATTCGTATGCTGGGGATCCGAATTCCATCCTACAGCAAGCTCAATTCAGTGCAACTGGTGAGTCCAAGCCAGCTGGTGGAGCGGCTGATTCTAACGAGGCCTCTGCTGGGGTTGGAAGCACAGCTGCTGACTCTACTATGGTATCTGACTACAATTCGTCTGTAAATGGTGGTGTTGCCGGTGCAGTGACAAATACTTCTGGACTTGAAAACGGGAATGCGTTGGAGAATGCTGATGGGTCGGCTGATGAGAAACAGCAAGCAGATGGTTATGCTGCCTTGTCTGCTGAAGAAGATCGACTGTGGAATATAGTGAGAGCTAATTCTTTAGATTTCACTGCCTGGACTTCCTTGATTGAAGAGACAGAGAAGGCAGCAGAGGACAATATTTTGAAGATTCGAAGAGTCTATGATGCTTTTCTAGCAGAATTTCCCTTGTGCTATGGTTATTGGAAGAAATATGCTGACCATGAGGCACGCCTTGGCTCTATTGATAAAGTTGTCGAAGTCTACGAGCGTGCGGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAACCACATATGGGGATCCAGACACTGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCTTTTCCCCTCTGGGATAAATACATTGAATATGAGTATATGCAGCAGGACTGGGCCCGCCTTGCCGTGATCTACACCAGAATATTAGAGAACCCAAATCAACAATTAGATCGGTATTTCAGCAGCTTCAAAGAGTTAGCTGGAAATCGACCTTTAACAGAGTTACGAACTGCTGATGAAGCTGCTGCAGTGGCAGGAGTTGCTTCAGAGGCTACTGGCCAAGCTACTGAGGGAGAGGTTCATCCTGATGGTGCAGAGCGTTCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCATGTACGGCCCCTCAATGTTGGAGAGCTTGAGAATTGGCATAACTATCTGGACTTTATAGAAAGGGAGGGTGACTTGAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCATGTGCCAATTATCCTGAGTATTGGATACGCTATGTTTTGTGTATGGAAGCCAGTGGAAGCATGGATCTTGCAAATAATGTTCTTGCTCGGGCAACCCAAGTCTTTGTTAAGAGACAACCAGAGATACATATTTTTTGTGCTCGGTTCAAGGAGCAGACTGGAGATATAGATGGTGCTAGAGCTGCATATCAACTTGTGCATACTGAAACTTCTCCTGGTCTTCTTGAAGCAATTATCAAACATGCCAATATGGAATACCGACTGGAAAAAATGGAGGATGCCTTCTCTTTGTATGAACAGGCCATTGCCATTGAGAAAGGAAAAGAACATTCACAAACATTGCCGATGTTGTTTGCTCAATATTCTCGATTTGTATATTTGGCTTCTGGGAATGCAGAGAAGGCAAGGCAGATTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAGGCTATATTGCATTTTGAGGCTATTCAACCCTTGCCAAAGCGCGTTGATATTGACTTTCTGGAGTCATGGGTTGTCAAATTCATAATGCCTAACTCAGAGAGTCCTGGTGTAGCAAGTGCAACAGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTAAATCTCTTTGGTGATGTTCAATCTATCAAGAGGGCTGAAGATAGGCATGCCAAATTGTTTTTGCCACACAGAAGCATGTCAGAGTTGAAAAAACGTCATGCTGAGGATTTCTTAGCTTCAGACAAAACAAAAGCGCCGAGATCTTATTCTGCTCAATCACCTGCCCAATCTGGGATGGGTGCATATCCAAATGCACAGAACCAGTGGTCTAATTATGGAGTTCAACCTCAAACTTGGCCTCCAGTTACACAAGCACAAGGGCAACAATGGACTGCTGGCTACACCCAACAGGCTTCCTACGGGGCTTATGCTGGATATGGGGGCAACTATGCGAATTCTCAATTGCCTACATCAGTTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCACAGCAACCTGCTGCGGTTCCTCAAGCCTATTACGGGAGTTATTATTGA 2487 0.4499 MGDSEAVVTEASAAEAYASAGYAETGSNPAPEAGATVDQSAGEAAQASSTYGYGYSNVGDVNSYAGDPNSILQQAQFSATGESKPAGGAADSNEASAGVGSTAADSTMVSDYNSSVNGGVAGAVTNTSGLENGNALENADGSADEKQQADGYAALSAEEDRLWNIVRANSLDFTAWTSLIEETEKAAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAITTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAVIYTRILENPNQQLDRYFSSFKELAGNRPLTELRTADEAAAVAGVASEATGQATEGEVHPDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHIFCARFKEQTGDIDGARAAYQLVHTETSPGLLEAIIKHANMEYRLEKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPLLEAILHFEAIQPLPKRVDIDFLESWVVKFIMPNSESPGVASATEREELSSIFLEFLNLFGDVQSIKRAEDRHAKLFLPHRSMSELKKRHAEDFLASDKTKAPRSYSAQSPAQSGMGAYPNAQNQWSNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPTSVPQSTAYGAYPPAYPAQPAVPQQNYAQPVAAAPAQQPAAVPQAYYGSYY 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01537 828 MobiDBLite consensus disorder prediction 23 46 - -
Gma03g01537 828 MobiDBLite consensus disorder prediction 706 725 - -
Gma03g01537 828 PANTHER PRE-MRNA-PROCESSING FACTOR 39 43 814 - -
Gma03g01537 828 MobiDBLite consensus disorder prediction 77 102 - -
Gma03g01537 828 SMART hat_new_1 258 293 IPR003107 GO:0006396
Gma03g01537 828 SMART hat_new_1 295 328 IPR003107 GO:0006396
Gma03g01537 828 SMART hat_new_1 189 221 IPR003107 GO:0006396
Gma03g01537 828 SMART hat_new_1 542 577 IPR003107 GO:0006396
Gma03g01537 828 SMART hat_new_1 223 255 IPR003107 GO:0006396
Gma03g01537 828 SMART hat_new_1 438 470 IPR003107 GO:0006396
Gma03g01537 828 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 43 814 - -
Gma03g01537 828 SUPERFAMILY TPR-like 382 685 IPR011990 GO:0005515
Gma03g01537 828 MobiDBLite consensus disorder prediction 350 372 - -
Gma03g01537 828 Gene3D Tetratricopeptide repeat domain 418 713 IPR011990 GO:0005515
Gma03g01537 828 MobiDBLite consensus disorder prediction 701 725 - -
Gma03g01537 828 Gene3D Tetratricopeptide repeat domain 164 331 IPR011990 GO:0005515
Gma03g01537 828 SUPERFAMILY TPR-like 166 325 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01537 Gma-Chr3 41614446 41624854 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01537 K13217 - gmx:100787373 1525.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01537 03 41614446 41624854 Gma03g01537 03 41614446 41624854 ECH
Gma19g01591 19 45284415 45299289 Gma03g01537 03 41614446 41624854 GST