Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01569 ATGGGCCATCGGGTCCATAACCAATACCTGAATGAAAGGCCCATTCTCGTTGAAACAAAACACTTGTGTAGTAGACCAGAGGATCTGAAAACCTTAAACCCTTTTCTCGCCTCCATCGCAGGTTTCTACCTATATTGCTGTTCTTTGCTTCGATTAGGATCAGTCACCATGTATCTTCAGTTTTACATAAACGATAACGGTGACAAAGTTTACACCACTAAGAAAGATTCGCCGCTAGGGCTACCTACACAATCTGCTCATCCAGCCCGGTTTTCACCTGATGATAAATATTCAAGGCAGAGAGTTCTTCTGAAGAAGCGTTTTGGATTGTTACCGACCCAGCAGCCACCTCCAAAGAAGTCGAAGTCGAAGTCGTCGCTTGCCAAGTGCATTTCTTCTCATTTCTTGCTGCTTCCGCGAATGGCCAGAAACATAGCAGGATTACTGGCGCTGCTTCTCGCTGTTTCGATCTGCGGAGCCGTCACGATTCCTGGTCCCGTCTCCGATGCTCACCGTTCCGCCGCGCTAGAGCTCTTCGATGGATCCTTTTCAAGTTTAGAAGAGGCCTATGAGGCCCTAAGAGTTTTTGAGATTCTTGGGATTGGGAATAAGCCTGATGTGAGCACAACCACTTGCAAGAAAGTAGCAGAAAACCTTGAGTTGTCATCGCCTGTGAAGGATTTGTTCTATTCGTTAAAGGTTAATGGCATATTAAAATGCAAGGTTGATGGGGATGTTTTCAAGGATATTGCTTTGAGACTTAAAGCCACTGTCAATGATGCAAGTACTTTGGTGGACATGTACTATTCAATAGGAAGTCTGGTTCTTATAAAGGACCAGGCTTCTGATGTTGATGTGCTTCTTACTGATGCTGATGGGACTTTCCATTCAATCAAGGCTCTGAGTCAAAGTGATGGAAGATGGCGTTATAGTTCTGATAATCCAGAATCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCACTGGCTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCAGTCTAGGGTGAATACAGTGAAAAATGATATATTGAAGCTTTTTGACAGCATTGAGAAATATGATGATGGAACCTTCTATTTTGATGAGAAATTTGTTGGTGGAAGTGAGCATCAGGGTTCTCTTTCCACAACTTCTTCTGTTGTTCAAGGGGTTACAGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTTTGGCAAATTTTTTCCTGGGAATTGGAATCCCAGGAGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTCTTCTAGAGAACAACAGGGTTTCCATCCCATTGGTACTGTCACTTCCTGCAACGGTTTATTCATTATCCAAAAAAGATCAGCTCAAGGTTAGGGTGAACACTGTACTTGGTTCAGCTGCACCACCTTTAACAGTTAAGCTTGTGCGAGCTTTCCGCTCTGATGCTAAAGATTCAGCTATTATTGAGAGCAAGGAGCTCCAATATGATCAAAATAATGGAATTCATGTCTTGGAAGCTTTCCCAAACAATGTGGATGTGGGAACTTATGCGTTTGTTTTTGAGATTGCACTTCATGATTCTGCTGGTGAAAAAGTTTATGCTACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGCATTATCAAAGTCAGCAATGCGGAAATTGCTGTTCTTGACAGTGATCTTGGAAGTGTTGAAACCCAAAAAACGCTAGATTTGGCTGGAAATGATGTTGTTTCACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTCCAATTGACAACACCTCATGATCATGCTTTTAAGCCTCTTCAGGCATTTTTCAAGTTGAAGCATGAGACAAAGCATGAACACATCTTTGTGGTTGGAAATACTGGCAAGAAGTTTGAGATTATTCTTGATTTTCTTGGTTTGGTGGAGAAATTTTATTACCTCTCAGGGAGATATGACATTGAGCTGACTGTCGGGGATGCTGTCATGGAGAACTCTTTCTTATGGCTGCTTGGTCAAGTTGATTTAGATCTTCCTGAAGCACCTGAGAAGGCAGCCCGTCTTCCTCCACTCCCTGTTGATCCTTACTCAAGATATGGGCCCAAAGCCGAGATAGCCCACTTATTCAGGGCTCCAGAAAAGCGACCACCCCAGGAACTCTCTCTTACTTTCTTGGGTTTGACCCTTCTGCCATTTATTGGCTTTTTGGTTGGGCTGTTACGCCTGGGAGTGAACTTGAAGAATTTTCCTTCTTCAGCAGTACCTGCTGCATATGCCATCTTATTCCAGCTTGGCATTGCCACTGTTCTATTGCTTTATGTACTTTTCTGGTTGAAGCTGGACTTGTTCACTACACTCAAAACTGTAGGATTTTTGGGAGCTTTTCTGTTGTTTGTGGGACACAGAATTCTTTCCCATCTCGCGTCAACATCATCCAAGTTGAAGTCTGCATAA 2487 0.4278 MGHRVHNQYLNERPILVETKHLCSRPEDLKTLNPFLASIAGFYLYCCSLLRLGSVTMYLQFYINDNGDKVYTTKKDSPLGLPTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKKSKSKSSLAKCISSHFLLLPRMARNIAGLLALLLAVSICGAVTIPGPVSDAHRSAALELFDGSFSSLEEAYEALRVFEILGIGNKPDVSTTTCKKVAENLELSSPVKDLFYSLKVNGILKCKVDGDVFKDIALRLKATVNDASTLVDMYYSIGSLVLIKDQASDVDVLLTDADGTFHSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGVISLASSEIDQSRVNTVKNDILKLFDSIEKYDDGTFYFDEKFVGGSEHQGSLSTTSSVVQGVTAFAAVTSGKINLPGDKILGLANFFLGIGIPGDAKDFFNQVESLALLENNRVSIPLVLSLPATVYSLSKKDQLKVRVNTVLGSAAPPLTVKLVRAFRSDAKDSAIIESKELQYDQNNGIHVLEAFPNNVDVGTYAFVFEIALHDSAGEKVYATGGQIHVPIYVTGIIKVSNAEIAVLDSDLGSVETQKTLDLAGNDVVSLSANHLQKLRFSFQLTTPHDHAFKPLQAFFKLKHETKHEHIFVVGNTGKKFEIILDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLWLLGQVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSLTFLGLTLLPFIGFLVGLLRLGVNLKNFPSSAVPAAYAILFQLGIATVLLLYVLFWLKLDLFTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01569 828 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 66 110 - -
Gma19g01569 828 SUPERFAMILY Nop10-like SnoRNP 59 114 IPR036756 GO:0001522|GO:0030515|GO:0042254
Gma19g01569 828 Pfam Oligosaccharyltransferase subunit Ribophorin II 148 820 IPR008814 GO:0006487|GO:0008250|GO:0016021
Gma19g01569 828 MobiDBLite consensus disorder prediction 75 95 - -
Gma19g01569 828 Pfam Nucleolar RNA-binding protein, Nop10p family 59 108 IPR007264 GO:0001522|GO:0030515|GO:0042254
Gma19g01569 828 PANTHER RIBOPHORIN II 135 828 IPR008814 GO:0006487|GO:0008250|GO:0016021
Gma19g01569 828 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 135 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01569 Gma-Chr19 45086641 45099161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01569 K12667 - gmx:100806815 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01569 19 45086641 45099161 Gma19g01569 19 45086641 45099161 ECH
Gma19g01569 19 45086641 45099161 Gma03g01513 03 41391706 41403187 GST