Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01513 ATGTATCTTCAGTTTTACATAAACGATAACGGCGACAAAGTCTACACCACTAAGAAAGAGTCGCCGGTAGGGCTACCTACACAATCTGCTCATCCAGCCCGGTTTTCACCCGATGATAAATATTCAAGACAGAGAGTTCTTCTGAAGAAGCGTTTTGGATTATTACCAACCCAGCAGCCACCTCCAAAGATATTATTGGAAACTAAAATTAATGCCACGACCAAGACGACGACGACTTCTAGTTCAGTTGCACTCAAGCCACTCCTCACTGGAAGTCGAAGTCTTCGCTTGCCAATTGCATTTCTTCTCAGCTTCTTGCTGCTTCCGCGAATGGCCCGAAACCTAGGAGGATTACTGGCGCTACTTTTCGCTGTTTCGATCTGCGGAGCCGTCACGATTCCCGGCCCCGTCTCCGATGCTCACCGTTCCGCCGCGTTAGAGCTCTTCGATGGATCGTTTTCAAGTTTAGAAGAGGCCTATGAGGCACTAAGAGTTTTTGAGATTCTTACGATTGGGAATAAGCCTGATGTGAGCACAACGACTTGCAAGAAAGTAGTGGAAAACCTTGGGTCGTCATCGCCTGTGAAGGATTTGTTCTATGCGTTAAAGGTTAATGACATATTAAAATGCAAGGTTAATGGGGATGTTTTCAAGGATATTGCTTTGAGACTTAAAGCCACTGTCAATGATGCGAGTACTTTGGTTGAGATGTACTATTCAATAGGAAGTTTGGTTCTTATAAAGGACCAGGCTTCTGATGTTGATGTGCTTCTTACTGATGCCGATGGATCCTTCCATTCAATCAAGGCTCTGAGCCAAAGTGATGGAAGGTGGCGTTATAGTTCTAATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCACTTGCTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCAGTCTAGGGTGAATACAGTGAAAAATGATATATTGAAGCTTTTCGACAGCATTGAGAAATATGATGATGGAACATTCTATTTTGATGAGAAATTTGTTGGTGGACGTGAGCATCAGGGTTCTCTTTCCACAACTTCTTCTGTTGTTCGAGGGGTTACAGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTTTAGCAAATTTTTTCCTGGGAATTGGAATCCCAGGAGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTCTTCTAGAGAACAACAAGGTTTCGATCCCATTGGTACTGTCACTTCCTGCAACGGTTTATTCATTATCCAAAAAAGATCAGCTCAAGGTTAGGGTGAACACTGTACTTGGTTCAGCTGCACCACCTTTAACAGTTAAGCTTGTGCAAGCTTTCCGCTCTAACGCTAAAGATTCAGCTATTGAGAGCAAGGAGCTCCAATATGATCAAAATAATGGAATTCATTTCTTGGAAGCTTTCCCAGACAATGTAGATGTGGGAACTTATGTGTTTGTTTTTGAGATTGCACTTCACGATTCTGCTGGTGAAAAAGTTTATGCTACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGCATTATTAAAGTCAGCAATGCTGAAATTGCTGTTCTTGACAGTGATCTTGGAAGTGTTGAAACCCAGAAAACGCTAGATTTGGCTGGAAATGATGATGTTTCACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTCCAGTTGACAACACCTCACGGTCATGCTTTTAAGCCTCATCAGGCATTTTTCAAGTTGAAGCATGAGACAAAGCATGAACACATCTTTGTGGTTGGAAATACTGGCAGGAAGTTTGAGATTATTCTTGATTTTCTTGGTTTGGTGGAGAAATTTTATTACCTCTCTGGCAGATATGACATTGAGCTGACTGTTGGGGATACTGTCATGGAGAACTCTTTCTTACGGCTGCTTGGTGAAGTTGATTTAGATCTTCCCGAAGCACCTGAGAAGGCAGCCCGTCTTCCTCCACTCCCTGTCGATCCTTACTCAAGATATGGGCCCAAAGCCGAGATAGCCCACTTATTCAGGGCTCCAGAAAAGCGACCACCCCAGGAACTCTCTCTTACTTTCTTGGGTTTGATCCTTCTGCCATTTATTGGCTTTTTAGTTGGGCTGTTACGCCTGGGAGTGAACTTGAAGAATTTTCCTTCTTCAGCTGTACCTGCTACATATGCCTTCTTATTCCATCTTGGCATTGCTGCAGTTCTATTGCTTTATGTACTTTTCTGGTTGAAGCTGGACTTGTTCACTACACTCAAAACTGTAGGATTTTTGGGAGCTTTTCTGTTGTTTGTGGGACACAGAATTCTTTCCCATCTCGCTTCAACATCATCTAAGTTGAAGTCTGCATGA 2394 0.4265 MYLQFYINDNGDKVYTTKKESPVGLPTQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKILLETKINATTKTTTTSSSVALKPLLTGSRSLRLPIAFLLSFLLLPRMARNLGGLLALLFAVSICGAVTIPGPVSDAHRSAALELFDGSFSSLEEAYEALRVFEILTIGNKPDVSTTTCKKVVENLGSSSPVKDLFYALKVNDILKCKVNGDVFKDIALRLKATVNDASTLVEMYYSIGSLVLIKDQASDVDVLLTDADGSFHSIKALSQSDGRWRYSSNNPESSTYAAGLALEALAGVISLASSEIDQSRVNTVKNDILKLFDSIEKYDDGTFYFDEKFVGGREHQGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLANFFLGIGIPGDAKDFFNQVESLALLENNKVSIPLVLSLPATVYSLSKKDQLKVRVNTVLGSAAPPLTVKLVQAFRSNAKDSAIESKELQYDQNNGIHFLEAFPDNVDVGTYVFVFEIALHDSAGEKVYATGGQIHVPIYVTGIIKVSNAEIAVLDSDLGSVETQKTLDLAGNDDVSLSANHLQKLRFSFQLTTPHGHAFKPHQAFFKLKHETKHEHIFVVGNTGRKFEIILDFLGLVEKFYYLSGRYDIELTVGDTVMENSFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSLTFLGLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLLLYVLFWLKLDLFTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01513 797 Pfam Nucleolar RNA-binding protein, Nop10p family 3 52 IPR007264 GO:0001522|GO:0030515|GO:0042254
Gma03g01513 797 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 10 54 - -
Gma03g01513 797 Pfam Oligosaccharyltransferase subunit Ribophorin II 118 789 IPR008814 GO:0006487|GO:0008250|GO:0016021
Gma03g01513 797 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 103 797 - -
Gma03g01513 797 SUPERFAMILY Nop10-like SnoRNP 3 58 IPR036756 GO:0001522|GO:0030515|GO:0042254
Gma03g01513 797 MobiDBLite consensus disorder prediction 18 37 - -
Gma03g01513 797 PANTHER RIBOPHORIN II 103 797 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01513 Gma-Chr3 41391706 41403187 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01513 K12667 - gmx:100780415 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01513 03 41391706 41403187 Gma03g01513 03 41391706 41403187 ECH
Gma19g01569 19 45086641 45099161 Gma03g01513 03 41391706 41403187 GST