Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01554 ATGGATATGGGGAAGAAAGAAGGTGAAGCCCCCGTGTTGTGGTTCGAAACCTCTGACTCTGTCTGTTGCCAACACCAGTTTGAACCCGATGGTCGACTCTCCGTAGTGATTGTTGATGATTCCAGGCCCCTATACCAAAGGATGGCTGGATCTTTCATGAATAAATTTTTCCCCTCAGGATATCCGTACAGTGTGAATGAAGGCTATCTTAGATACACGCAGTTTCGAGCTTTGCAACATGTTACCAGTGCAGCACTATCGGTGCTATCAACTCAGTCCTTGCTATTCGCTGCAGGGTTGCGGCCCACTCCTGCGCAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCTAGAATGGATTCTGAACCTAAACGTTGGAGACTACTAGCTGATGTGCTCTATGATATAGGCATTGGCTTGGAAGTGCTTTCTCCATTATGCCCGCATCTTTTTCTTGAAATGGCAGGCTTAGGAAATTTTGCAAAGGGGATGGCTGTTGTTGCAGCAAGAGCAACAAGGTTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGCGACCTATTTGCTAAAGGAGAGGCTTTTTCAACTCTCTTTAATGTTGTTGGAATTGGAGTAGGAATTCAATTAGCATCTACCATTTGTGCATCAATACAGGGAAAGTTGGTTGCGGGTCCTCTCCTTTCAATTATACATTTATACAGTGTGTCTGAAGAAATGAGAGCAACTCCTATCAATACGTTGAATCCACGAAGAACTGCAATGGTTGTGGCTGATTTTCTCAAGGCAGGAATTGTATCGAGCCCTGCTGATTTGAGATATCGAGATAATCTGCTGTTCAATGTGCAAGTCAAAGAAGACACTGGAAACGTAAGAGTGGGGAAGAATGTGCACAAGGTCATTAAGCCTTCCAGGCTTCTTGAATTAAAACAAGTGTTCCCCGAGGAGAAATTTCTCTTAAATTTTGGGAATAAATGCATTGACATGGTATTGGAACAAGATGCTAGTGGTGAAGATGCACTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACGAACTGAGAGTTCCTCTCATGAGCTCAGTGCTACTAGTGTCCTGCATGAGGCTTATGAGAAAATGAATGGTGTCTTTCCTGTATTCTTAAGGGAATTACAGAACAAAGGGTGGCACACTGATCGGTTTTTGGATGGAACTGGGAGCCGTTTTTCATTCTAG 1260 0.4357 MDMGKKEGEAPVLWFETSDSVCCQHQFEPDGRLSVVIVDDSRPLYQRMAGSFMNKFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLADVLYDIGIGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNVVGIGVGIQLASTICASIQGKLVAGPLLSIIHLYSVSEEMRATPINTLNPRRTAMVVADFLKAGIVSSPADLRYRDNLLFNVQVKEDTGNVRVGKNVHKVIKPSRLLELKQVFPEEKFLLNFGNKCIDMVLEQDASGEDALRGWLVAAYAARTESSSHELSATSVLHEAYEKMNGVFPVFLRELQNKGWHTDRFLDGTGSRFSF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01554 419 PANTHER RUS1 FAMILY PROTEIN C16ORF58 6 419 IPR006968 -
Gma19g01554 419 Pfam Vitamin B6 photo-protection and homoeostasis 47 278 IPR006968 -
Gma19g01554 419 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 6 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01554 Gma-Chr19 44921486 44925619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01554 - - gmx:100804154 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01554 19 44921486 44925619 Gma19g01554 19 44921486 44925619 ECH
Gma19g01554 19 44921486 44925619 Gma03g01499 03 41232495 41236690 GST
Gma19g01554 19 44921486 44925619 Gma13g01033 13 24487790 24491609 PCT
Gma13g01033 13 24487790 24491609 Gma19g01554 19 44921486 44925619 PCT