Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01033 ATGGATTTCCCGTTCCTGGAAAAGCTGAAAATTTGGAAGAAAAAAGCAGAGCAAGAAGAAGAAGGTCCTCCTCTGGTGTGGTTCGAAACCTCTGCCACTGTTTCTCGCCGCTTCCAGTTTGAACCCAATGGCCAACTTTCTGTAACGCTTGTTGGTGATTCTAGGCCATTATACCACAGGATTGTTGACTCTTTCTTGAATAAATTTTTCCCTTCAGGATATCCATACAGTGTGAATGAAGGTTACCTCAGATACACGCAGTTTCGAGCACTGCAACACACTGCGAGTGCCGCGCTATCAGTGTTATCAACTCAGTCACTGCTATTTGCTGCAGGCTTGCGGCCCACTCCTGCACAAGCGACTGCTGTTAGTTGGGTTTTAAAGGACGGTATGCAACATTTAGGGAATATAATATGTAGCAAGTTGGGTGCAAGAATGGATTCTGAGCCTAAACGTTGGAGAATCTTAGCTGATGTGCTCTATGATTTAGGGACTGGTTTGGAAGTTCTTTCTCCCTTGTGTCCACAGTTTTTTCTTGAGATGGCAGGCATAGGGAATTTGGCCAAGGGGATGTCAATTGTTGCATCACGAGCTACAAGATTACCTATATATTCTTCATTTGCTAAAGAAGGAAATCTAAGTGACCTATTTGCTAGAGGGGAGGCTATTTCAACTCTCTTTAATGTTGTTGGAATTGGAATTGGAATTCAATTAGCATCTACTGTATGTGCGTCAATGCAGGGAAAGTTGGTTGTGGGGCCTCTACTATCAATTATACACATATACAGTGTTTCTGAAGAAATGAGAGCAACTCCTGTCAATACATTGAATCCACAAAGGACTGCAATGATTGTGGCTGATTTTCTCAAGGCTGGAAGTGTATCAAGCCCAGCTGATCTAAGATATCGAGAAGATTTGCTATTTCCTCGAAGACTCATAGAAGATGCTGGAAATGTAAGAGTTGGTAGGGATTTGCACAAGGTTATTAAGCCTTCAAGGCTTCTTGAATCAAAACAAGTATTCCCTGGGGAGAAGTTTATTTTAAATGGTGATAATAGGTGCATCGACATGGTATTGGAGCAGGATGCTATCGGCAAAGATGCATTGAGAGGGTGGCTAGTTGCTTCATATGCTGTACAAATTGGCAAGTCCTCTCACGAGCTCAGTACCAGTACCCTGCTACAGGCCTATGAGAAAATGAATGAGGTCTTCCCTGCCTTTATAAAAGAATTACAGTGCAAAGGGTGGCATACAGATCGGTTTCTTGATGGAAGTGGTTGCCGCTTTGCATTGTAG 1296 0.429 MDFPFLEKLKIWKKKAEQEEEGPPLVWFETSATVSRRFQFEPNGQLSVTLVGDSRPLYHRIVDSFLNKFFPSGYPYSVNEGYLRYTQFRALQHTASAALSVLSTQSLLFAAGLRPTPAQATAVSWVLKDGMQHLGNIICSKLGARMDSEPKRWRILADVLYDLGTGLEVLSPLCPQFFLEMAGIGNLAKGMSIVASRATRLPIYSSFAKEGNLSDLFARGEAISTLFNVVGIGIGIQLASTVCASMQGKLVVGPLLSIIHIYSVSEEMRATPVNTLNPQRTAMIVADFLKAGSVSSPADLRYREDLLFPRRLIEDAGNVRVGRDLHKVIKPSRLLESKQVFPGEKFILNGDNRCIDMVLEQDAIGKDALRGWLVASYAVQIGKSSHELSTSTLLQAYEKMNEVFPAFIKELQCKGWHTDRFLDGSGCRFAL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01033 431 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 6 430 - -
Gma13g01033 431 Pfam Vitamin B6 photo-protection and homoeostasis 60 291 IPR006968 -
Gma13g01033 431 PANTHER RUS1 FAMILY PROTEIN C16ORF58 6 430 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01033 Gma-Chr13 24487790 24491609 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01033 - - gmx:100814176 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01554 19 44921486 44925619 Gma13g01033 13 24487790 24491609 PCT
Gma03g01499 03 41232495 41236690 Gma13g01033 13 24487790 24491609 PCT
Gma13g01033 13 24487790 24491609 Gma19g01554 19 44921486 44925619 PCT
Gma13g01033 13 24487790 24491609 Gma03g01499 03 41232495 41236690 PCT