Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01486 ATGAAGGAGTTTCCTTCTTGTTTTGGAGAAAATGGTGTTCAGGTAGTAGATTCCTCCTATTCAAGCACCACAAGGGGAGCTCAAAATGCTGTTACTTGTGTATATCAGTGTAAGTTAGGAGGCCGTTCATGCTTGATCACTGTCTCTTGGACCAAAAATTTGATGGGACAAGGCTTGAGTGTGGGAATAGATGAGTTGGGCAATCATTGCCTCTGCAAGGTTGACATAAAGCCGTGGCTGTTCTCAAAAAGGAAAGGGTCAAAGAATTTGGAGGTTGAGTCTAATAAAATTGATATACTTTGGGACTTGAGCTGTGCTAAATTTGGCTCCGGGCCAGAACCGTTGGAGGGTTTTTACTTAGTTGTTGTGTTCAATCAAGAGATGGTCTTACTCCTAGGGGATCTGACAAAGGAGGCATGCAAGAAGATTGACAGTGACTATGCTTGTGCTCACTCTGAAGCCGTTTTTATTGCAAAGAGAGAGCACATTTTTGGCAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTATGACAAAGGCCAGGTGCATGATGTGAGAATTGAGTGTGACACACTAGGGCTTAATGATCCATGTCTTGTGATTAGAATTGATAGGAAGACAGTGATGCAGGTGAAGCAACTCAAGTGGAAGTTTAGGGGCAATCACACCATCGTGGTGGATGGAATATCCGTGGAAGTGTTTTGGGATGTACATAATTGGCTCTTTGGAAATGCTATGGGAAATGCAGTTTTTATGTTCCAAACTTGCATTTCAACTGAGAAGCTGTGGTCAAGCCAATCTGTTTCTGATCCTTCTGTTCCCACATGGGCTTATTCTCAGCAGTTCAGGGATTCCCAGTTGCAAGGGAACAATTTTCTAAGTCAATTCAACCAAACCAAAGCATAA 903 0.4252 MKEFPSCFGENGVQVVDSSYSSTTRGAQNAVTCVYQCKLGGRSCLITVSWTKNLMGQGLSVGIDELGNHCLCKVDIKPWLFSKRKGSKNLEVESNKIDILWDLSCAKFGSGPEPLEGFYLVVVFNQEMVLLLGDLTKEACKKIDSDYACAHSEAVFIAKREHIFGKKFYGAKAQFYDKGQVHDVRIECDTLGLNDPCLVIRIDRKTVMQVKQLKWKFRGNHTIVVDGISVEVFWDVHNWLFGNAMGNAVFMFQTCISTEKLWSSQSVSDPSVPTWAYSQQFRDSQLQGNNFLSQFNQTKA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01486 300 Pfam Plant protein of unknown function (DUF868) 27 274 IPR008586 -
Gma19g01486 300 PANTHER EXPRESSED PROTEIN 1 291 IPR008586 -
Gma19g01486 300 PANTHER PLANT/T24G3-80 PROTEIN 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01486 Gma-Chr19 44198097 44200881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01486 1 268 EF-hand Containing Proteins AT5G28150 63.838 1.50e-118 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01486 - - gmx:100786850 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01486 19 44198097 44200881 Gma19g01486 19 44198097 44200881 ECH
Gma19g01486 19 44198097 44200881 Gma03g01428 03 40483537 40486851 GST
Gma19g01486 19 44198097 44200881 Gma10g00261 10 2414844 2416132 PCT
Gma19g01486 19 44198097 44200881 Gma02g01336 02 15515774 15516679 PCT
Gma10g00261 10 2414844 2416132 Gma19g01486 19 44198097 44200881 PCT
Gma02g01336 02 15515774 15516679 Gma19g01486 19 44198097 44200881 PCT