Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01428 ATGAAGGAGTTTCCTTCTTGTTTTGGAGAAAATGGTGTTCGGGTTGTAGATTCCTCCTATTCAAGCACCACAAGGGGAGCACAAAATGCTGTTACTTGTGTCTATCAGTGCAAGTTAGGAGGTCGTTCATGCTTGATCACTGTCTCTTGGACCAAAAATTTGATGGGACAAGGCTTGAGTGTGGGAATAGATGAATTAGGCAATCATTGCCTCTGCAAAGTTGACATAAAGCCATGGTTGTTCTCAAAAAGGAAAGGGTCAAAGAATTTGGAGGTTGAGTCTAATAAAATTGATATACTTTGGGACTTGAGCTGTGCTAAATTTGGTTCTGGGCCAGAACCATTGGAGGGTTTTTACTTAGTTGTTGTGTTCAATCAAGAGATGGTGTTACTCCTAGGGGATCTGAAAAAGGAGGCATGCAAGAAGATTGATAGTGACTATGCTTGTGCTGATCACTCTGAAGCCGTTTTTATTGCAAAGAGAGAGCACATTTTTGGCAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTGTGACAAGGGTCAGGTGCATGATGTGAGGATTGAGTGTGACACACTAGGGCTTAATGATCCATGTCTTGTGATTAGAATTGATAGCAAGACAGTGATGCAGGTGAAGCAACTCAAGTGGAAGTTTAGGGGAAATCACACCATTTTGGTGGATGGAATACCCGTGGAAGTGTTTTGGGATGTACATAATTGGCTATTTGGAAATGCTATGGGAGATGCAGTTTTTATGTTCCAAACTTGCATTTCAACTGAGAAGCTGTGGTCAAGTAGCCAATCATCTGTTTCTGATCCTTCTGTTCTCACATGGGCTTATTCTCAGCAGTTCAGGGATTCACAGTTGCAAGGTAAAGAACATCTCCAAAGAAGGAAACTTAAATTTGGTGGATATCCCCCTTCTTTCGTGTACAAATTGTGA 942 0.414 MKEFPSCFGENGVRVVDSSYSSTTRGAQNAVTCVYQCKLGGRSCLITVSWTKNLMGQGLSVGIDELGNHCLCKVDIKPWLFSKRKGSKNLEVESNKIDILWDLSCAKFGSGPEPLEGFYLVVVFNQEMVLLLGDLKKEACKKIDSDYACADHSEAVFIAKREHIFGKKFYGAKAQFCDKGQVHDVRIECDTLGLNDPCLVIRIDSKTVMQVKQLKWKFRGNHTILVDGIPVEVFWDVHNWLFGNAMGDAVFMFQTCISTEKLWSSSQSSVSDPSVLTWAYSQQFRDSQLQGKEHLQRRKLKFGGYPPSFVYKL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01428 313 Pfam Plant protein of unknown function (DUF868) 27 285 IPR008586 -
Gma03g01428 313 PANTHER EXPRESSED PROTEIN 1 290 IPR008586 -
Gma03g01428 313 PANTHER PLANT/T24G3-80 PROTEIN 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01428 Gma-Chr3 40483537 40486851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01428 1 274 EF-hand Containing Proteins AT5G28150 62.319 4.80e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01428 - - gmx:100799355 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01428 03 40483537 40486851 Gma03g01428 03 40483537 40486851 ECH
Gma19g01486 19 44198097 44200881 Gma03g01428 03 40483537 40486851 GST
Gma03g01428 03 40483537 40486851 Gma10g00261 10 2414844 2416132 PCT
Gma03g01428 03 40483537 40486851 Gma02g01336 02 15515774 15516679 PCT
Gma10g00261 10 2414844 2416132 Gma03g01428 03 40483537 40486851 PCT
Gma02g01336 02 15515774 15516679 Gma03g01428 03 40483537 40486851 PCT