Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01471 ATGGAAGCAACGCGATTCTCCCCTAATCACTTCTATCCACACTGCTTCCTTACCAAACCCAACGCACTCAGAGAAAGAAGATACGTAAAATGCATCAACGGAGTTGGAACTAGGGTTTACCTTTTCACAAACCCCGCATTCAACAACGCACCGAACCGGTCTTTGTTTCCGAAGCTGAACCGGACTCTCTCTGTTAGCTTCTCCGACCGGCTCCGAGATGATTATGTGCGCGTCGATGCTCCGAGGAGCAAGGAAGTTGTTCCGGCGACACGCGGCGGCGATGGAGGGGAGGCGATTCTTGCGTCGTCTCCGAGTGCTGACAACTCGGGAACCCTGCAACTGAAACCATTGATGTTCAGGAACAGGTTTCTGAACTTTGCGCGATTGGGTTCTGTGATTAACGGCGCCGCGGAATCGTTTTTCAAGAGCGAGATTCGGAGGAGGCTGTTCGTAACGGCTGTGTTAATTGTGATTAGTCGCGTTGGCTATTTTATTCCTCTTCCGGGGTTTGACAGAAGGTTGATACCGGAAGACTACTTGAGCTTTGTCGCAGGATCATCTGTTGATGAACTTGGTGACTTCACTGCTGAGCTCAAGCTATCTATTTTCCAGCTTGGGATCAGTCCTCAGATAATCAATCGCGTCCATTATTGTGCAGTAAACTTACGGAAAGAAGGTCTGGATGGGCATGAGAAGATTAAGAGTTATATATGGTGGATGTCATTTGGCTTTGCAATTTTGGAAGCTTTAATAGTGGCTTGTTACTCACTTCCATATTCAATTTATGCTGCCACTTATAGGGTCAAGCATGTAATGGTGACATCTGTTTTATTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTAATAATATGCGTGGGAATACTTACGGGATATATGGAGACATTATACAAAATGCTTACTCAGCTTTCAGGTTGGTTCCATTATTGA 993 0.4552 MEATRFSPNHFYPHCFLTKPNALRERRYVKCINGVGTRVYLFTNPAFNNAPNRSLFPKLNRTLSVSFSDRLRDDYVRVDAPRSKEVVPATRGGDGGEAILASSPSADNSGTLQLKPLMFRNRFLNFARLGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPEDYLSFVAGSSVDELGDFTAELKLSIFQLGISPQIINRVHYCAVNLRKEGLDGHEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAATYRVKHVMVTSVLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSGWFHY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01471 330 Pfam SecY 201 322 IPR002208 GO:0015031|GO:0016020
Gma19g01471 330 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 123 325 IPR002208 GO:0015031|GO:0016020
Gma19g01471 330 SUPERFAMILY Preprotein translocase SecY subunit 129 327 IPR023201 -
Gma19g01471 330 PRINTS Preprotein translocase SecY subunit signature 268 293 - -
Gma19g01471 330 PRINTS Preprotein translocase SecY subunit signature 149 167 - -
Gma19g01471 330 PRINTS Preprotein translocase SecY subunit signature 294 317 - -
Gma19g01471 330 PRINTS Preprotein translocase SecY subunit signature 200 220 - -
Gma19g01471 330 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 123 325 - -
Gma19g01471 330 Gene3D SecY subunit domain 133 329 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01471 Gma-Chr19 43947726 43952521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01471 53 328 Miscellaneous Gene Families AT2G31530 62.500 1.02e-115 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01471 - - gmx:100803256 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01471 19 43947726 43952521 Gma19g01471 19 43947726 43952521 ECH
Gma19g01471 19 43947726 43952521 Gma03g01408 03 40226406 40236425 GST