Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01456 ATGGCAATTCTCGCGCCACGCTTTTCATTCTCAGTGATTCCTCGGAATCACCACAAACTCAAACGCTCTTTTTCTCACAAACCCTTTATCCAAAGGAAGCAGCTTTGGCACCAACTTGGATTGCAAAGCCTCGTTTCCCCCTTTTCCCTTAACCCCACTTCTTCAAAATTGTGTGCCACGTCACGGTTGTCCATTGAGGAAACGGAGCAGCAAATCGGAACCTTGACCCGACCCGAAGACCTAAAAGGGTCATTGGCGTATCTGTTTAGGACTGAAACTGGTGGCGGTTTGGTGAAAGTTCATGTCACAAGGAGAAATGATAGGTATTCTGTTTACATTGAGATTTCTTCGTTGGATATAAGTGGCGGTGTTGGTGAAGCGCTTTTGTTGTGTTGGGGTGTGTATAGAAGTGATTCATCGTGTTTTGTGGATCTGGATACGATAGGTTTGAGTGAAAATGCGGCAATGGGGATGAATGTTAGTCCCTTGGTGCAAAATTCTGATGGAAAGTTTGCAATTGAGTTGGAATTTGATGCCAAGCATGTTCCTTTGTACTTGTCGTTTTTCTTGATGTCGTCTTTGGATTCAGGGTTGGAGATCAGAAGCCATAGGAGAACGAATTTTTGCATGCCGGTTGGGTCGCTTCCTGGGTACCCTTGTCCTTTGGGGGTCTCTTATTCTCCTGATGGGTCTGTGAATTTTTCTATTTTCTCTAGACATGCTGAGAGTGTGGTTTTGTGCTTGTATGATGAGAATGGCGTGGAGAAGCCTGCTTTGGAGCTTGATTTGGATCCTTATGTGAATAGGACAGGTGATATCTGGCATGTCTCGTTTGAGAGTGCTAAGGGTTTTGTGAGCTATGGTTATCGCTGCAGACGGGGTGTTCTTAAGAAGAACAAGGATGATGGTTTTGCTGAGCATGTTGTTTTGGATCCGTATGCTAAGATTGTTGGGAACTCTTATCCTGATGGTGTTGGATTAGTGAAGAATCTTGGATGTTTGAGGAAGGAACCTTTTTTTGATTGGGGTGGTGATCGTCATCCGGATTTGTCCATGGAGAAACTAGTGGTTTATAGGTTGAATGTGAAGCGCTTTACGCAACACGAGTCCAGCCAACTTCCAAGTGGCTTAGCTGGGACCTTTACTGGTTTGGCTAAGAAGGTGCAGCATTTTAAAGATCTAGGAGTGAACGCCGTTCTGCTGGAGCCGGTTTTCACGTTTGATGAGAAAAAGGGACCATATTTTCCTTGCCACTTTTTCTCTCTGATGCACATTTATGGACCATCTGGTGGTCCTGTATCTGCTATTGCCGCTATGAAAGAGATGGTTAAAACTATGCATGCCAATGGGATAGAAGTTCTTGTGGAAGTTGTTTTCTCCAATACCGCAGAGATTGGTGCTATACAGGGAATTGATGACTCGTCCTACTATTATGCAAATGGAGTTGGTGGTTTGAAGGTGCAGAGTGCTTTGAACTGTAACTATCCTATAGTGCAAAATTTGATTCTGGATAGTCTTCGGCATTGGGTGACTGAGTTTCACATTGATGGCTTCTCTTTCATAAATGCTTCACACCTGCTGAGGGGATTTCATGGGGAGTACTTGTCTAGACCTCCATTAGTTGAAGCAATTGCTTTTGACCCAGTACTCTCCAAGACTAAAATCATTGCAGATTGTTGGGATCCCCATGGCATGGTAGCAAAGGAAATTCGCTTTCCTCATTGGATGAGATGGGCTGAAATGAATACACATTTTTGTAATGATGTGAGGAACTTTTTAAGGGGTCAAAATCTTCTTAGCGACCTGGCAACAAGACTCTGTGGGAGTGGGGACATTTTTTCTGGTGGACGAGGCCCTGGATTCTCTTTTAATTACATTGCCAGGAACTTTGGAGTTTCTCTTGTGGACTTAGTTAGCTTCAGCAGTGTGGATGAATTAAGTTGGAATTGTGGAGCAGAAGGACCTACTAACAACACTGCTGTTCTTGAAAGACGACTCAAGCAAATCCGTAATTTCCTCTTCATCTTGTTTGTGTCATTAGGAGTACCTGTTCTGAACATGGGAGATGAATGTGGCCAGTCTTCTGGTGGTTTTACTGCATATGATGGTATAAAGCCTTTCAGTTGGAGTGCTTTGAAAACAGGCTTTGGTAAACAAACCTCAGAATTCATTTTCTTTTTAAGTTCATTGAGAAAGAGGAGGAGCTATCTTCTTCAGAGGAGGAGCTTCTTAAAAGAAGAAAACATTGAATGGTATGGAAGTGATGGGGATCCACCAAGATGGGAAGACCCATCCTGCAAGTTCCTGGCAATGATTTTGAAGGCTGAAGTAACGGAGTTCTTAGAGAGCTCTGTATCTTCTGATATATCCGGGGATCTATTTATTGCTTTCAATGCAACTGATCATCCAGAAACTGCAGTTTTACCCTTGCCTCCAGAAGGAATGTCATGGTACCGTTTAGTTGACACGGCTCTTCCATTTCCCGGCTTTTTCTCGACCAGTGGTGAAGTTGTCCCTGAGCAGACAGAAGCAATGCATTCACCTCCCCTGCAAAGTCCATCCTTAACAGATTGCCATCAGCTTGGGCAAAGAAAAAAGAAGAGCTTCTCACAGTGCGATGGTGATGATAATGGGGGTTCAAGGCAGTGCGGTGGTTGCAAATGTAGTGGTTGCCAGAGGCGCCTGGAGAAGGCAGCAGACTGCAATGGCAGCTTCTAG 2718 0.4419 MAILAPRFSFSVIPRNHHKLKRSFSHKPFIQRKQLWHQLGLQSLVSPFSLNPTSSKLCATSRLSIEETEQQIGTLTRPEDLKGSLAYLFRTETGGGLVKVHVTRRNDRYSVYIEISSLDISGGVGEALLLCWGVYRSDSSCFVDLDTIGLSENAAMGMNVSPLVQNSDGKFAIELEFDAKHVPLYLSFFLMSSLDSGLEIRSHRRTNFCMPVGSLPGYPCPLGVSYSPDGSVNFSIFSRHAESVVLCLYDENGVEKPALELDLDPYVNRTGDIWHVSFESAKGFVSYGYRCRRGVLKKNKDDGFAEHVVLDPYAKIVGNSYPDGVGLVKNLGCLRKEPFFDWGGDRHPDLSMEKLVVYRLNVKRFTQHESSQLPSGLAGTFTGLAKKVQHFKDLGVNAVLLEPVFTFDEKKGPYFPCHFFSLMHIYGPSGGPVSAIAAMKEMVKTMHANGIEVLVEVVFSNTAEIGAIQGIDDSSYYYANGVGGLKVQSALNCNYPIVQNLILDSLRHWVTEFHIDGFSFINASHLLRGFHGEYLSRPPLVEAIAFDPVLSKTKIIADCWDPHGMVAKEIRFPHWMRWAEMNTHFCNDVRNFLRGQNLLSDLATRLCGSGDIFSGGRGPGFSFNYIARNFGVSLVDLVSFSSVDELSWNCGAEGPTNNTAVLERRLKQIRNFLFILFVSLGVPVLNMGDECGQSSGGFTAYDGIKPFSWSALKTGFGKQTSEFIFFLSSLRKRRSYLLQRRSFLKEENIEWYGSDGDPPRWEDPSCKFLAMILKAEVTEFLESSVSSDISGDLFIAFNATDHPETAVLPLPPEGMSWYRLVDTALPFPGFFSTSGEVVPEQTEAMHSPPLQSPSLTDCHQLGQRKKKSFSQCDGDDNGGSRQCGGCKCSGCQRRLEKAADCNGSF 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01456 905 SUPERFAMILY Glycosyl hydrolase domain 746 839 - -
Gma19g01456 905 Gene3D - 747 860 IPR013780 -
Gma19g01456 905 Gene3D Immunoglobulins 209 325 IPR013783 -
Gma19g01456 905 SUPERFAMILY E set domains 216 348 IPR014756 -
Gma19g01456 905 Gene3D Glycosidases 336 746 - -
Gma19g01456 905 PANTHER ISOAMYLASE 2, CHLOROPLASTIC 61 854 - -
Gma19g01456 905 Pfam Alpha amylase, catalytic domain 379 463 IPR006047 GO:0005975
Gma19g01456 905 SMART aamy 359 734 IPR006047 GO:0005975
Gma19g01456 905 CDD E_set_GDE_Isoamylase_N 221 359 IPR044505 -
Gma19g01456 905 SUPERFAMILY (Trans)glycosidases 340 737 IPR017853 -
Gma19g01456 905 CDD AmyAc_plant_IsoA 351 739 IPR044096 GO:0019156|GO:0019252
Gma19g01456 905 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 221 314 IPR004193 GO:0004553|GO:0005975
Gma19g01456 905 PANTHER GLYCOGEN DEBRANCHING ENZYME 61 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01456 Gma-Chr19 43759605 43763008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01456 55 838 Glycoside Hydrolase AT1G03310 58.312 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01456 K01214 - gmx:100777953 1708.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01456 19 43759605 43763008 Gma19g01456 19 43759605 43763008 ECH
Gma19g01456 19 43759605 43763008 Gma03g01393 03 40039840 40043181 GST