Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01447 ATGCGCGCCAAAACGAATCGCAAGTCAAAGAACCGAGTCGCGATTCCTCCACCGGCGAAATCGGAATCCATCATCGAGACCTACCGTCGCGACCTGCAGGAGTTCGGCACCGGTTTGAAGAAGGAGATTGAGGTCGCTCACCGCTCCCTCGAGACGGTGGGCCACGTCATCGACCAATTCGGAAACACCGTCGCCAAAGGCACCGCTCACATCACATCATATCTCGATTCCGATAATAATAATAACAGAAACAACCCCGGCACCAAAGAAAAAAAGAGCTTCATTTCGAAGCGCTATAGTAGGTTTGACTCACAGGTTCGTGCAATTCAGAGTGACGTTAGCACTTACACCGAAGTGCCGGAGGATTCGGATGAGTATAATGAGTGGAAATCGAGGTTTTCGTTGGAAGAAAAGAGGGACGAAATGGAAGGATTTTTAAACGATAATGCGGCTATGGAGAGTGTTTACAAGAGGGTTGTTCCCAGTGTTGTTGACCATGACACGTTTTGGTGTAGGTATTATTATAGAGTTTACAGGCTCAAGAAAGCTGAGGATGTGAGGGCGAGGCTCGTGAGGAGAATGTCGAGGGACGAGGAGGAGTTGAGTTGGGATGTTGAAGAAGAAGATGAGAATAAGGGAAAAGAAGGAGATTCTGTGTTGCATGGGGATGGAACAAATAGATTGAATGTGGAAGAGATGCATAAGTCTGCTGAGGAGGGGTCTAAGGAAGAAAAGAGAGGTGATTTATTGCAAAGCAAGGGAGATGAGTCTGTTGAAGAATCAAAGGCTGGCAAGAACAAAGAGGTTGTTGAGAAGATGAGTGATGGAACTAAGAAAAATTCATTGGTTGCAAATAAGCACTCGAAGAATGAGAAGGAGGAGGAGGAGGACCTTGAGTGGGATGAGATAGAGGATCTTAGTAGAATTGATGAAGAGAAGGCAACTCGGATGGGTAGCCATACCAAAGTTGATTTGCGGAAGCGCCGCCTCAGTGCTGCTCAAGAGCAAGAAGAAGAAGACTTGAGTAGGGAAATTGAAGAAGATGATGAGCCTGCTAATGCTAAGGCATGA 1071 0.4659 MRAKTNRKSKNRVAIPPPAKSESIIETYRRDLQEFGTGLKKEIEVAHRSLETVGHVIDQFGNTVAKGTAHITSYLDSDNNNNRNNPGTKEKKSFISKRYSRFDSQVRAIQSDVSTYTEVPEDSDEYNEWKSRFSLEEKRDEMEGFLNDNAAMESVYKRVVPSVVDHDTFWCRYYYRVYRLKKAEDVRARLVRRMSRDEEELSWDVEEEDENKGKEGDSVLHGDGTNRLNVEEMHKSAEEGSKEEKRGDLLQSKGDESVEESKAGKNKEVVEKMSDGTKKNSLVANKHSKNEKEEEEDLEWDEIEDLSRIDEEKATRMGSHTKVDLRKRRLSAAQEQEEEDLSREIEEDDEPANAKA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01447 356 Coils Coil 327 347 - -
Gma19g01447 356 Pfam BSD domain 129 185 IPR005607 -
Gma19g01447 356 PANTHER SYNAPSE-ASSOCIATED PROTEIN 19 45 - -
Gma19g01447 356 PANTHER SYNAPSE-ASSOCIATED PROTEIN 45 349 - -
Gma19g01447 356 SUPERFAMILY BSD domain-like 99 186 IPR035925 -
Gma19g01447 356 PANTHER PROTEIN, PUTATIVE-RELATED 45 349 - -
Gma19g01447 356 PANTHER PROTEIN, PUTATIVE-RELATED 19 45 - -
Gma19g01447 356 MobiDBLite consensus disorder prediction 207 275 - -
Gma19g01447 356 Gene3D BSD domain 91 192 IPR035925 -
Gma19g01447 356 Coils Coil 180 200 - -
Gma19g01447 356 MobiDBLite consensus disorder prediction 198 356 - -
Gma19g01447 356 MobiDBLite consensus disorder prediction 307 338 - -
Gma19g01447 356 MobiDBLite consensus disorder prediction 75 89 - -
Gma19g01447 356 ProSiteProfiles BSD domain profile. 129 181 IPR005607 -
Gma19g01447 356 MobiDBLite consensus disorder prediction 75 94 - -
Gma19g01447 356 SMART wurzfinal6 129 181 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01447 Gma-Chr19 43681001 43682147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01447 - - gmx:102665065 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01447 19 43681001 43682147 Gma19g01447 19 43681001 43682147 ECH
Gma19g01447 19 43681001 43682147 Gma03g01379 03 39925498 39926919 GST
Gma19g01447 19 43681001 43682147 Gma10g00229 10 2122807 2124342 PCT
Gma19g01447 19 43681001 43682147 Gma02g01366 02 15803342 15805165 PCT
Gma10g00229 10 2122807 2124342 Gma19g01447 19 43681001 43682147 PCT
Gma02g01366 02 15803342 15805165 Gma19g01447 19 43681001 43682147 PCT