Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01379 ATGAATTTCTTCAcctcctttttctccgacgacgacgacgacgacgacaatgctcgccaaaccgaatcgcaagacgaagaagAAGCGAGTCGCGATTCCGAGCACCTATCCGATTCCCCCACCAGCGACGGCGGCGCGTGGGAATTCAGCGGCCTATGGAAAACCCTAAGCGCGAAATCGGAATCCATCATCGATACCTACCGTCGCGACCTGCAGGAATTCGGCACCGGTTTGAAGAAGGAGATTGAGGTCGCTCACGGTTCCCTCGAGACGGTGGGCCACGTCATCGACCAGTTCGGAAACACAGTCGTCAAAGGCACCTCTCACATCAAATCATATCTCGATTCCGATAATAATAACAGAAACAACAACCCCGGCGGCAACGAAGAAAAAAAGAGTTTCAATTCGAAGCGCTATTATAATAGGTTTGACGCACAGGTTCGTGCAATTCAGGGTGACGTTAGCACCTACACCGAAGTGCCTGAGGATTCGGATGAGTATACTGATTGGAAATCAGGGTTTTCGTTGGAAGGGAAGAGTGATGAAATTGAGGATTTTTTAAAAGAGAGTGAGGCGATGGAGAGTGTTTTCAAGAGGGTTGTTCCCAGTGTTGTTGACCGTGACACGTTTTGGTGTAGGTATTATTATAGAGTTTATAGGCTCAAGAAAGCTGAGGATGTGAGGGCGAGACTCGTGAGGAGAATGTCGAGGGAAGAGGAGGAGTTGAGTTGGGATGTTGAAGATGATGATGATGATGGTGATGGGGATGAGAATAAGGGGAAAGAGGGAGATTCTGAGTTGCATGGTGATGGAACAAAGAAATTGAATGTGGAAGAGATGCATAAGTCTGGTGAGGAGGGGTCTAAGGAAGAAAAGAGAGGTGATTTATTGCAAAGCAAGGGAGATGAGTGTGTCGAAGAATCAAAGGTTGACAAGAACAAAGAGGTTGTTGAGAAGATGGGTGATGGAAGTAGTAAGAAAACTATCAATGAAGATGATGAGAGGAAAGATTCTGGTGTGGATTCTGGTAAGAAAGTGATAATGGAAAGTAAAGTTGATGATGGAAAAGATTCGTTGGTTGCAAATAAGCACTCGGGGAACAAGAAAGAGGAGGAGGATCTTGAGTGGGATGAAATTGAGAATCTTAGTAGAATTGATGAAGAGAAGGAAGTTCGGACGGGTAGCCCTACCAAAGTTGATTTGCGGAAGCGCCTCAGTGCTGCTCAAGAGCAAGACGAAGAAGACGACTTGAGTTGGGACATTGAAGATGATGATGAACATGCTAAGGCATGA 1293 0.4331 MNFFTSFFSDDDDDDDNARQTESQDEEEASRDSEHLSDSPTSDGGAWEFSGLWKTLSAKSESIIDTYRRDLQEFGTGLKKEIEVAHGSLETVGHVIDQFGNTVVKGTSHIKSYLDSDNNNRNNNPGGNEEKKSFNSKRYYNRFDAQVRAIQGDVSTYTEVPEDSDEYTDWKSGFSLEGKSDEIEDFLKESEAMESVFKRVVPSVVDRDTFWCRYYYRVYRLKKAEDVRARLVRRMSREEEELSWDVEDDDDDGDGDENKGKEGDSELHGDGTKKLNVEEMHKSGEEGSKEEKRGDLLQSKGDECVEESKVDKNKEVVEKMGDGSSKKTINEDDERKDSGVDSGKKVIMESKVDDGKDSLVANKHSGNKKEEEDLEWDEIENLSRIDEEKEVRTGSPTKVDLRKRLSAAQEQDEEDDLSWDIEDDDEHAKA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01379 430 SUPERFAMILY BSD domain-like 139 227 IPR035925 -
Gma03g01379 430 ProSiteProfiles BSD domain profile. 170 222 IPR005607 -
Gma03g01379 430 MobiDBLite consensus disorder prediction 112 133 - -
Gma03g01379 430 Pfam BSD domain 170 226 IPR005607 -
Gma03g01379 430 PANTHER SYNAPSE-ASSOCIATED PROTEIN 84 424 - -
Gma03g01379 430 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 84 - -
Gma03g01379 430 MobiDBLite consensus disorder prediction 382 411 - -
Gma03g01379 430 MobiDBLite consensus disorder prediction 8 22 - -
Gma03g01379 430 PANTHER PROTEIN, PUTATIVE-RELATED 84 424 - -
Gma03g01379 430 PANTHER PROTEIN, PUTATIVE-RELATED 1 84 - -
Gma03g01379 430 Gene3D BSD domain 132 231 IPR035925 -
Gma03g01379 430 MobiDBLite consensus disorder prediction 258 372 - -
Gma03g01379 430 MobiDBLite consensus disorder prediction 1 46 - -
Gma03g01379 430 MobiDBLite consensus disorder prediction 239 430 - -
Gma03g01379 430 MobiDBLite consensus disorder prediction 23 38 - -
Gma03g01379 430 MobiDBLite consensus disorder prediction 242 257 - -
Gma03g01379 430 SMART wurzfinal6 170 222 IPR005607 -
Gma03g01379 430 Coils Coil 221 241 - -
Gma03g01379 430 MobiDBLite consensus disorder prediction 112 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01379 Gma-Chr3 39925498 39926919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01379 - - gmx:102665065 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01379 03 39925498 39926919 Gma03g01379 03 39925498 39926919 ECH
Gma19g01447 19 43681001 43682147 Gma03g01379 03 39925498 39926919 GST
Gma03g01379 03 39925498 39926919 Gma10g00229 10 2122807 2124342 PCT
Gma03g01379 03 39925498 39926919 Gma02g01366 02 15803342 15805165 PCT
Gma10g00229 10 2122807 2124342 Gma03g01379 03 39925498 39926919 PCT
Gma02g01366 02 15803342 15805165 Gma03g01379 03 39925498 39926919 PCT