Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01435 ATGAAGACAGGAAAGGGGAAGAACAACGGCTTGTTGCCGAATTCGTTGAGGATTGTCTCTCTATGCCTCAAAACTGTGTCAACGAATGCCACCACCGTTGCTTCCACCGTGCGCTCCGCCGGCGCCTCCCTCGCAGCTTCTATTTCCTCGTCTTCGGAGGATCACAAAGATCAGGTAACCTGGGCTGGTTTTGATACACTGGAGCTTGATTCATCTAACCTCAAACGTGTTCTTTTACTTGGTTATCTGAATGGATTTCAAGTTCTTGATGTTGAGGATGCCTCTGGCTTCAGTGAACTGGTCTCAAAGCGCGATGGTCCAGTTTCTTTTTTACAGATGCAGCCCTTGGCTGTAGGTTGTGATGGTCAGGAGGGATTCAGAAAGTCACACCCTTTACTGTTGGCTGTTTGTGGGGATGACACTAGCAAGGTAAACCACAAAAGTACCAGTTTGAGTGGTGTAGGAAGGGATGGTAATGTTGAAACCCAAACGAGGAACAATGTCAATTCTTCAACCGTTGTTCAGTTTTACTCCTTGAAGTCTCACTCTTATGTTCATGTTCTGAGGTTCCGTTCAACTGTGTGTATGATCAGATGCAGTTCAAGGATAGTAGCGGTTGGTCTTGCAACACAAATACACTGCTTTGATGCTTCGACTCTTGAGAATAAGTTAAGTGTTCTCACTTATCCTGTTACTCAGTTAGCTGGACAAGGAACAACTGGTGTTAATGTTGGTTATGGTCCAATGGCTCTGGGTCGAAGGTGGTTGGCATATGCTTCTAACAGCCCCCTGCCCTCTAATTTAGGTTGCTTAAGCCCACAAAACTTCAGTGCTTCTCCGGGAATTAGTCCATCAACTTCTCCAAGCAGTGGTAGTTTAGTGGCTCGGTATGCAATGGAGTCTAGTAGACATTTAGCTGCCGGAATAATCAAATACTGTCAAGAGCTGCTTCCTGATGGTTCCTCTTCTCCCGTGTCATCAAATTCAGGTGTGAAAGTCGATAGGGTTACAGGAATTGATGCAGATAATGCGGGAATGGTAGTTGTCCAGGATTTTGTTTCTAGAAGTATCATATCACAATTCAAAGCTCACACTAGTCCTATATCTGCACTATGTTTTGACCCTAGTGGGACCCTTCTGGTCACTGCATCAGTATATGGGAATAACATTAATATATTTCGGATAATGCCATCATTCACATGCAAGAGTTCAGCCACTCCAAGCTCCAACTGGAACTCTTCTCATGTGCATCTTTATAAACTTCATCGCGGAATAACACCAGCTATGATTCAGGACATTTGTTTCAGTAATTTTAGTCAGTGGATTGCAATTGTCTCATCCAAGGGTACTTGTCATCTTTTTGTTTTGTCACCCTTTGGGGGTGATACTGGCTTTCAAATTATTAGTTCTCAGGGTGAAGAACCGTCCCTACTCCCTGTTGTTTCTCTGCCTTGGTGGTATACTCCGGCTTCCATTCCTTACCAGCCATCTTTGCCTCCTCCAGCACCTGCTGTTCTTTCTGTGGCTAGCCGGATAAAATATAGTAGTTTTGGATGGCTTAATACTGTTCACAACTCTTCTACAAATGTGACTGAAAAAGTTTTTGTGCCATCTGGTGCCATTGCTGCCATCTTTCACAATTCCTTGTCTCACTCGCAACAGCCTGTTAACTCAAAGGCAAAACCCTTAGAACATATATTGGTATATACACCTTCAGGTCATGTAGTTCAACATGAACTTCTGCCATCTGTTGGTTTAGGAACAACTGATAGTGGTTTGAGAAACCAGTCAACTTCAGTCTTGCATATGCAGGAGGATGAGTTCAGAGTCAAAGTTGAACCTATTCAATGGTGGGATGTATGTAGAAGGTCAGAATGGCCAGAAAGAGGGGATTCTTGCTGCAGTACCTTTGATAGACAAGGAGGTATTGAGGGAGTTCAAGAGAAAATAAGTTATAGTGACTTCCATGGATTGGATTTTGTGGGCTCAAGAGATGAGGCAGGGGAAAAGATGGTAAAATCGTCCAGTGAGAATATGCAAGACAGGTTCCATTGGTATCTGTCTAATGCGGAGGTGCAAGGGAATTTTGGAAGGTTACCCATATGGCAAAAGTCTAAGATTTGTTTCTATTCAATGAGTTGTGCAGGAGCTAGTTTCAGTGGTACTGGGGAGTTTGAAATTGAAAAGGTCCCTGCTAATGAAGTTGAAATAAGGCGAAAGGAGCTGCTTCCTGTTTTTGACCATTTTCATAGCATCAGATCAAGCTGGAATGAGAGAGGTCTTGCTGGGGACAGATATTTAAGCTCTACATCTCCTGTTCTCGATCAAGCTGATGACAAGGAAACTGCTGATGTGACAGTTATTTGTCATTCAAAGCCAGCATCACTGAGTTCCACTGAAAGCTCAGAAGGAGGTTCATCAAGAAGAATTGAAAATCTGCTTGACTTGGATCAAGTTGCTTCTAGTTATCAAATACTTGGTGAGATATGCCTGGAAAGAATGGGGACAATCAATGTTGAGCCTTGTCTACAAAACCAGATTGTGATGAGTCCATCATGTCTGTCTGGAAACTTGAAACATGTTGATTTCAACGCTGACCACATTGCCAGTCCTATATTCCAAGGGAGAAATATAACTTCTGAAGGAAGAGATTCTATAGGTGTTGAGATCAGTGAGAACTCAGCATTGGTTCTAGAACATGCTTCACACGAGACTGAATTTGTGGAAGTAGCCTTGGCAAAGCAAAATGAAGGTGTTGGGATATCTTTCAAGGATACCCACTGCAAAACACAGGAGCATGATGGGAGTGACGTGTTAACTGAAGTTGTAACTGATGATGTTGACAGCAGCTGTAGCTACCATGAAAGAGAGCAACTAGAGGAGCATGGGGAGAACGATGAAATGCTTGGTGGCATATTTTCCTTTTCCGAAGAAGTTGCAGATGGTGTAGTATGA 2955 0.4325 MKTGKGKNNGLLPNSLRIVSLCLKTVSTNATTVASTVRSAGASLAASISSSSEDHKDQVTWAGFDTLELDSSNLKRVLLLGYLNGFQVLDVEDASGFSELVSKRDGPVSFLQMQPLAVGCDGQEGFRKSHPLLLAVCGDDTSKVNHKSTSLSGVGRDGNVETQTRNNVNSSTVVQFYSLKSHSYVHVLRFRSTVCMIRCSSRIVAVGLATQIHCFDASTLENKLSVLTYPVTQLAGQGTTGVNVGYGPMALGRRWLAYASNSPLPSNLGCLSPQNFSASPGISPSTSPSSGSLVARYAMESSRHLAAGIIKYCQELLPDGSSSPVSSNSGVKVDRVTGIDADNAGMVVVQDFVSRSIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSFTCKSSATPSSNWNSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLFVLSPFGGDTGFQIISSQGEEPSLLPVVSLPWWYTPASIPYQPSLPPPAPAVLSVASRIKYSSFGWLNTVHNSSTNVTEKVFVPSGAIAAIFHNSLSHSQQPVNSKAKPLEHILVYTPSGHVVQHELLPSVGLGTTDSGLRNQSTSVLHMQEDEFRVKVEPIQWWDVCRRSEWPERGDSCCSTFDRQGGIEGVQEKISYSDFHGLDFVGSRDEAGEKMVKSSSENMQDRFHWYLSNAEVQGNFGRLPIWQKSKICFYSMSCAGASFSGTGEFEIEKVPANEVEIRRKELLPVFDHFHSIRSSWNERGLAGDRYLSSTSPVLDQADDKETADVTVICHSKPASLSSTESSEGGSSRRIENLLDLDQVASSYQILGEICLERMGTINVEPCLQNQIVMSPSCLSGNLKHVDFNADHIASPIFQGRNITSEGRDSIGVEISENSALVLEHASHETEFVEVALAKQNEGVGISFKDTHCKTQEHDGSDVLTEVVTDDVDSSCSYHEREQLEEHGENDEMLGGIFSFSEEVADGVV 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01435 984 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 6 978 IPR045142 GO:0006914
Gma19g01435 984 Pfam WD domain, G-beta repeat 358 386 IPR001680 GO:0005515
Gma19g01435 984 Pfam Breast carcinoma amplified sequence 3 501 744 IPR022175 -
Gma19g01435 984 SUPERFAMILY WD40 repeat-like 169 454 IPR036322 GO:0005515
Gma19g01435 984 SMART WD40_4 412 455 IPR001680 GO:0005515
Gma19g01435 984 SMART WD40_4 354 394 IPR001680 GO:0005515
Gma19g01435 984 Gene3D - 21 464 IPR015943 GO:0005515
Gma19g01435 984 PANTHER AUTOPHAGY-RELATED PROTEIN 18H 6 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01435 Gma-Chr19 43616189 43622497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01435 - - gmx:100818381 1853.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01435 19 43616189 43622497 Gma19g01435 19 43616189 43622497 ECH
Gma03g01369 03 39862620 39869183 Gma19g01435 19 43616189 43622497 ECH
Gma19g01435 19 43616189 43622497 Gma03g01369 03 39862620 39869183 GST