Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01369 ATGAAAAAAGGAAAGGGGAAGAACAACGGCTTATTGCCCAATTCGTTGAGGATTATCTCTCTGTGCCTCAAAACTGTGTCCACCAATGCCACCACCGTTGCTTCCACCGTGCGCTCCGCCGGTGCCTCCGTCGCCGCTTCTATTTCGTCTTCTTCTGAGGATCACAAAGATCAGGTAACCTGGGCTGGTTTTGATACACTGGAGCTTGATCCAGCTAACTTAAAACGTGTTCTTCTACTTGGTTATCTGAATGGATTTCAAGTTCTTGATGTTGAGGATGCCTCTGGCTTCCGTGAACTGGTCTCAAAGCGCGATGGTCCAGTTTCTTTTTTACAGATGCAGCCTTTCCCAGTAGGTTGTGATGGCCAGGAGGGATTCAGGAAGTCGCACCCTTTACTGTTGGTGGTTTCCGGGGATGACACTAGCAATGCAAACCAGAACAGTACCAGTTTGAGTGGTTTAGGAAGGGATGGTAACTTTGAGACTCAACCGGGGAACAATGTCAACTCTTCAACAGTTGTTCGGTTTTACTCCTTGAAGTCTCACTGTTATGTTCATGTTCTGAGGTTCCGTTCAACTGTATGTATGATCAGATGCAGCTCAAGGATAGTAGCGGTTGGTCTTGCCACACAAATATACTGCTTTGATGCTGTGACTCTTGAGAATAAGTTCAGTGTTCTCACTTATCCTGTTTCTCAATTCGCTGGACAAGGAACAACTGGTGTTAATGTTGGTTATGGTCCAATGGCTGTGGGTCCAAGGTGGTTGGCATATGCTTCTAACAACCCCCTGCCCTCTAATTTAGGTTGCTTAAGCCCACAAAACTTCAGTGATTCTCCAGGAATTAGTCCATCAACTTCTCCAAGCAGTGGTAGTTTAGTGGCTCGTTATGCAGTGGAGTCCAGCAGACATTTAGCTGCCGGAATAATCAAATACTGTCAAGAGCTGCTTCCTGATGGTTCCTCTTCTCCCATACAATCAAATTCAGGTGTGAAAGTCAATAGGGTTACAGGAATTGATGCAGATAATGCAGGAATGGTAGTCATTAAGGATTTTGTTTCCAGAAGTATCATATCACAATTCAAAGCTCACACTAGTCCTATATCTGCACTATGTTTTGACCCTAGTGGGACCCTTCTTGTCACTGCATCAGTCTATGGGAATAACATTAATATATTTCGGATAATGCCGTCATTCACATGCAAGAGTTCAGGCATTCCAAGCTCCAATTGGAACTCTTCTCATGTGCATCTTTATAAACTTCATCGTGGAATAACACCAGCTATGATTCAGGACATTTGTTTCAGTAATTTTAGTCAGTGGATTGCAATTGTCTCATCCAAGGGTACTTGTCATCTTTTTGTTTTGTCACCCTTTGGGGGTGATACTGGTTTTCGAATTATTAGTTCTCAGGGTGAAGAACCGTTCCTACTCCCTGTTTTTTCTCTGCCTTGGTGGTATACTCCAGCTTCCATTTCTTATCAGCAATCTCTGCCTCCCCCAGCACCTGTTGTCCTTTCTGTGGCTAGCCGGATAAAATATAGTAGTTTTGGATGGCTTAATACTGTTCACAATTCTTCTGCAAATGTGACAGGAAAAGTTTTTGTGCCATCTGGTGCCATTGCTGCCATCTTTCATAATTCCTTATCTCACTCGCAACAGCTTGTTAACTCAAAGGCAAAACCCTTAGAACATATATTGGTTTATACACCTTCAGGTCATGTAGTTCAACATGAACTTCTGGCATCTGTTGGTTTAGGAACAACTGATAATGGTTTGAGAAACCAGTCAACTTCACTCTTGCATATGCAAGAGGATGAGTTCAGAGTCAAAGTCGAACCTATTCAATGGTGGGATGTATGTAGAAGGTCAGAATGGCCAGAAAGAGGGGATACTTGCTGCAATACCTTTGATAGACAAGGAGGTATTGAGAGAGTTCAAGAGAAAATAAGTTATAGTGATGTCCATGGATTGAATTTTTTGGGCACAAGAGATAGGGCAGGGGAAAAGATGGTAAGATCTTCTAATGAGAATATGCACGACAGGTTTCATTGGTATCTGTCTAATGCGGAGGTGCAAAGGAATTTTGGAAGGTTACCCATATGGCAAAAGTCTAAGATTTGTTGCTATTCAATGAGTTGTGCGGGAGCTAGTTTCAGTGCTACTGGGGAGTTTGAAATTGAAAAGGTCCCTGTTAATGAAGTTGAAATAAAGCGGAAGGAGCTGCTTCCTGTTTTTGACCATTTTCATAGCATCAGATCAAGCGGGAATGAGAGAGGCCTTTCTGGGGAAAGATATTTAAGCCCTATATCTCCTGTTCACAATCAAGCTGATGACAAGGAAACTGTTGATGTAACAGTTATTTGTCATTCAAAGCCAGCATCACTGAGTTCCACTGAAAGCTCCGAAGGAGGTTCATCAAGAAGAATTGAAAATCTGCTTGACTTGGATCAAGTTGCTTCTAGTTATCAAATACTTGGTGAGATATGCCTGGAAAGAACGGGGACAATCAACGTTGAGCCTGCTCTACAAAACCAGATTGTGATGAGTCCATCATGTCTGTCTGGAAACTTGAAACAGGTTGATTTTAACGCTGACCATATTGCCAATCCTATATTACAAGGGAGAAATATAACTTCTGAAGGAAGAGATTCTATAGGTGTTGGGATCAGTGAGAACTCGGCATTGGTCCCAGAACATGATTCACACGAGACTGAATTTGTGGAAGTAGCCTTAACAAAGCAAAATGAAGATGTTGGGATATCTTTCAAGGATGGCCACTGCAAAACACAGGAGCCTGATGAAAGTGACGTGTTAACTGAAGTTGTAACTGATGATGTTGACAGCAGCAGTAGCCACCATGAAAGAGAGCAACTGGAGGAAGATGAGGAGAATGATGAAATGCTTGGTGGCATATTTGCCTTTTCCGAAGAAGGTTGA 2940 0.4265 MKKGKGKNNGLLPNSLRIISLCLKTVSTNATTVASTVRSAGASVAASISSSSEDHKDQVTWAGFDTLELDPANLKRVLLLGYLNGFQVLDVEDASGFRELVSKRDGPVSFLQMQPFPVGCDGQEGFRKSHPLLLVVSGDDTSNANQNSTSLSGLGRDGNFETQPGNNVNSSTVVRFYSLKSHCYVHVLRFRSTVCMIRCSSRIVAVGLATQIYCFDAVTLENKFSVLTYPVSQFAGQGTTGVNVGYGPMAVGPRWLAYASNNPLPSNLGCLSPQNFSDSPGISPSTSPSSGSLVARYAVESSRHLAAGIIKYCQELLPDGSSSPIQSNSGVKVNRVTGIDADNAGMVVIKDFVSRSIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSFTCKSSGIPSSNWNSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLFVLSPFGGDTGFRIISSQGEEPFLLPVFSLPWWYTPASISYQQSLPPPAPVVLSVASRIKYSSFGWLNTVHNSSANVTGKVFVPSGAIAAIFHNSLSHSQQLVNSKAKPLEHILVYTPSGHVVQHELLASVGLGTTDNGLRNQSTSLLHMQEDEFRVKVEPIQWWDVCRRSEWPERGDTCCNTFDRQGGIERVQEKISYSDVHGLNFLGTRDRAGEKMVRSSNENMHDRFHWYLSNAEVQRNFGRLPIWQKSKICCYSMSCAGASFSATGEFEIEKVPVNEVEIKRKELLPVFDHFHSIRSSGNERGLSGERYLSPISPVHNQADDKETVDVTVICHSKPASLSSTESSEGGSSRRIENLLDLDQVASSYQILGEICLERTGTINVEPALQNQIVMSPSCLSGNLKQVDFNADHIANPILQGRNITSEGRDSIGVGISENSALVPEHDSHETEFVEVALTKQNEDVGISFKDGHCKTQEPDESDVLTEVVTDDVDSSSSHHEREQLEEDEENDEMLGGIFAFSEEG 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01369 979 SUPERFAMILY WD40 repeat-like 172 454 IPR036322 GO:0005515
Gma03g01369 979 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 6 978 IPR045142 GO:0006914
Gma03g01369 979 MobiDBLite consensus disorder prediction 140 166 - -
Gma03g01369 979 SMART WD40_4 412 455 IPR001680 GO:0005515
Gma03g01369 979 SMART WD40_4 354 394 IPR001680 GO:0005515
Gma03g01369 979 Pfam Breast carcinoma amplified sequence 3 501 744 IPR022175 -
Gma03g01369 979 Gene3D - 26 472 IPR015943 GO:0005515
Gma03g01369 979 MobiDBLite consensus disorder prediction 923 979 - -
Gma03g01369 979 PANTHER AUTOPHAGY-RELATED PROTEIN 18H 6 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01369 Gma-Chr3 39862620 39869183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01369 - - gmx:100785780 1822.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01369 03 39862620 39869183 Gma03g01369 03 39862620 39869183 ECH
Gma03g01369 03 39862620 39869183 Gma19g01435 19 43616189 43622497 ECH
Gma19g01435 19 43616189 43622497 Gma03g01369 03 39862620 39869183 GST