Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01417 ATGAAGGAAAAGAAGAATACTGCCTCTACTCTAAAGCGCATTTTAGTGAATTGTTCATCTCAGGCAAAAGCATACGGGAGCTGTGTTGCAGCGAAGGTTCCAGACATTGAGCGTGATATGTGTGTGAAGGAATTTGCGGCACTAAAAAGTTGTATGCAGAATATGCTCAAAAAGAAGGTCCTACAACTTTTTGGAGGCAAAGTTGTTATTTTACATCTGCCACTCATTTATCCGCCACTTCGGTGCAATGTTCCTGGATCAAGTGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCTCCAACAGCTGACCAGGTTTTTTCATGGAAAGTTGGTCCCTTTGATACTCTCATTGATCCAACCACTGATTCAATAAGTGAAGGCCCTATCATAGCTATTCGGTATTCTTTAGACACAAAGGTAATAGCAATCCAACGTTCAAACCATGAGATACAGTTTTGGGATAGAGAGACTGGGGGGACTTTTAGCCATAAGTGCAGGCCAGAATCAGAAAGTATACTTGGATTCTTTTGGACAGATAGTCAACAGTGTGATATTGTTCTTGTTAAGACCAGTGGTCTAGACTTGTACGCATATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGCCTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCAATGGATTTCAGATTTCATCTGCAGATATTGTTCGCTTGCCAAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCAGCTGAAGATGCCTTCATTGTCACCGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCTATGCTGCTTCATTCTTATAGGCTATATCGTGATGCAGTGATTCAGCAGGGCTCTTTACCAATTTATTCCAACAGTATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTGTTTGCAGATTCTCGAGCACCAATATCTGCACCGCTTCCTTTGCTATTAAGGGGTTTCCCCAGATCCAGCACTTTATCTCAATCTAGTGGTAGAGAAAGTGAGAGCACAGACGGTAATGTTTTGAGCAATCATGAAGCAGTTACATATGCCAATACATGGACTTTTCTAGTGCCTGACCTCGTATGTGACGTGGCCAATAAGTTATTGTGGAAGTTCTATTTAGACTTAGAGGTCAGTTATTTGTTCATTTATGTGCCAATACTGAACATAGGTGCCTTCTCTTTCATGAATAATCCTATCTTGCAGGCAATTTCTGCTAGTAGCTCAGAGGTCCCATCAGTATTAGAGTTCCTGCAGCGGCGGAAGTTGGAAGCTAACAAGGCTAAACAATTGTGCTTGGGTATAGCACGTGCACTTATTCTAGAGCATAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCACCTCATACTCCCATTCAATTAAAACTGGTAGCTATTTTAAGGGACTGAAACCAGAGAAGTCATCAACTTCTGTTGTACAAAATACTGGTGCTGAGGTATCTGCTATCGAAACAGATGTAATTGGAAAATCAATCATCCATGAATCTACGAGAAGAGTAGACAGTGGATCTCTTAATAAAGCGTCAACTGTTTCAAGTTTGGATTCTGAGGATGAGTCCCAGTCTGCAAATCCAAAACACAGTTCAAAGGAAGCCCAAGTGGAGGGTGAAGTGAATAATGAGATATCTCTGAGCACTGGAGCTCACAGTTCTTATGTTATGCAATCATCTCTTCAGTCTGGGCAAGAGGAATCCCAACTTACTTCTGCAGCAGTTTCGCCAGACGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTTGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTCAGAGAAGATTCGTATACTCCCAAATGTTTATGTATTAATAATTCAACTAATGGCCCGCAATGAACATTATGCAGAGCTCGGGTTGTTTGTCTTAAACAAGATTCTGGAGTCCTCTAAAGAAGTTGCACTACAACTACTAGAGTCTGGCCGCCAGAATGCCCAAACTAGGAAGCTTGGTCTGGATATGCTAAGACAACTTGGTTTACATCATGATTATGTTTTACTGCTTGTGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAGTACAGGAATTACTTTCAGGTGGATACGATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATGACTCCCAACATCTTGCTGCGGTTCTAAGATTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCAGACCATAATAGATACTGCTGCATACTGAATGAAATGAACTCATCCACGACTGTTTGA 2457 0.4123 MKEKKNTASTLKRILVNCSSQAKAYGSCVAAKVPDIERDMCVKEFAALKSCMQNMLKKKVLQLFGGKVVILHLPLIYPPLRCNVPGSSGLFYDDGNKLLLSPTADQVFSWKVGPFDTLIDPTTDSISEGPIIAIRYSLDTKVIAIQRSNHEIQFWDRETGGTFSHKCRPESESILGFFWTDSQQCDIVLVKTSGLDLYAYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFNGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDAFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSNSIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTLSQSSGRESESTDGNVLSNHEAVTYANTWTFLVPDLVCDVANKLLWKFYLDLEVSYLFIYVPILNIGAFSFMNNPILQAISASSSEVPSVLEFLQRRKLEANKAKQLCLGIARALILEHRPVPVVAKAVNVLVTSYSHSIKTGSYFKGLKPEKSSTSVVQNTGAEVSAIETDVIGKSIIHESTRRVDSGSLNKASTVSSLDSEDESQSANPKHSSKEAQVEGEVNNEISLSTGAHSSYVMQSSLQSGQEESQLTSAAVSPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRILPNVYVLIIQLMARNEHYAELGLFVLNKILESSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYRNYFQVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSDHNRYCCILNEMNSSTTV 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01417 818 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 445 814 IPR040371 GO:0010506|GO:0035658
Gma19g01417 818 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 71 421 IPR040371 GO:0010506|GO:0035658
Gma19g01417 818 MobiDBLite consensus disorder prediction 557 573 - -
Gma19g01417 818 MobiDBLite consensus disorder prediction 574 588 - -
Gma19g01417 818 MobiDBLite consensus disorder prediction 557 590 - -
Gma19g01417 818 Pfam Colon cancer-associated protein Mic1-like 647 791 IPR009755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01417 Gma-Chr19 43449431 43457816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01417 K24763 - gmx:100500389 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01417 19 43449431 43457816 Gma19g01417 19 43449431 43457816 ECH
Gma19g01417 19 43449431 43457816 Gma03g01353 03 39695754 39706618 GST