Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01353 ATGAAGGAAAAGAAGAATACTGCCTCTACTCTCAAGCGCATTTTAGTGAATTGTTCATCTCAGGCAAAAGCATATGGGAGCTGTGTTGCAGCGAAGGTTCCAGATATTGAACGTGATATGTGTGTGAAGGAATTTGAGGCACTAAAAAGTTGTATGCAGAATATGCTAAAAAAGAAGGAGTTTTCAATCATAAGTCTGAGAGGAAGGTCCTACAACTTTTTGCAGGCAAAGTTTTTATTTTACATCTGCCATTCATTGTGTCTGAGTGGATCTGATGGTCTTTCACATGCTTACATTCAGTATCCGCCACTTCGGTTCAATGTTCCTGGATCAAGTGGATTATTTTATGATGATGGAAATAAGTTTCTACTCTCTCCAACAGCTGACCAGGTTTTTTCTTGGAAAGTTGGTCCCTTTGATCCTCTCAGTGATCCAAACACTGATTCAATAAGTGAAGGCCCCATTATAGCTATTCGGTATTCTTTAGACACAAAGGTAATAGCAATCCAACGATCAAACCATGAGATACAGTTTTGGGATAGAGAGACTGGGGGGACTTTTAGCCATAAATGCAAGCCAGAATCAGAAAGTATACTTGGATTCTTTTGGACAGATAGTCAACAGTGTGATATTGTTCTTGTTAAGACCAGTGGTCTAGACTTGTACACATATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGCCTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCCATGGATTTCAGATTTCAGCTGCTGATATTGTTCGCTTGCCTAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCATCTGAAGATGTCTTTATTGTAACTGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCTATGCTGCTCCATTCTTATAGGCTATATCGTGATGCAGTGATACAGCAGGGCTCTTTACCAATTTATTCCAGTAGGATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTGTTTGCAGATTCCCGAGCACCGATATCTGCACCACTTCCTTTATTATTAAGGGGTTTCCCCAGATCCAGCACTTTATCTCAATCTAGTGGCAGAGAAAGTGAGAGTTCAGACGGTAATGTTTTGAGTAATCATGAAGCAGTTACATATGCCAATACATGGACTTTCCTAGTGCCTGACCTCGTATGCGACGTGGCCAATAAATTATTGTGGAAGTTCAATTTAGACTTAGAGGTCAGttatttatttatttatttatttatttatGTGCCAATACTGTACATGAATAATCCTATCTTGCAGGCAATTTCTGCTAGTAGCTCTGAGGTCCCATCAATATTAGAGTTCCTGCAGCGGCGGAAGTTGGAAGCTAACAAGGCTAAACAATTGTGCTTGGGTATAACACGTACACTTATTCTAGAGCATAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCACCTCATACTCCCATTCAATTAAAACCGGTAGCTATCTTAAGGGACTGAAACCAGAGAACACATCAACTTCTGTTGTACAAAATACTGGTGCTGAGGTATCTGCTACCGAAACAAATGTAATTGGAAAATCAATCGTCCATGAATCTACAAGAAGAGTAGACAGTGGATCTCTTAATAAAGCTTCAACTGTTTCAAGTTTGGATTCTGAGGATGAGTCCCAGTCTGCAAATCTGAAACATAGTTCAAAGGAAGTCCAAGTGGAGGATGAAGTGAATAATGAGATATCTTTGAGCAAAGGAGCTCACAGTGCTTATGTTATGCAATCATCTCTTCAGTCTGGGCAAGAGGAATCCCAACTTACTTCCGCAGCAATTTCGCCAGACGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTTGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTTCTTCACAGTGCAAATTCAGAGAAGATTCGCATACTCCCAAATGTTTATGTATTAATAATTCAACTTCTGGCCCGCAATGAACATTATGCAGAGCTCGGGTTATTTGTCTTAAACAAGATTCTGGAGCCCTCTAAAGAAGTTGCACTACAACTCCTAGAGTCTGGTCGTCAGAATGCCCAAACTAGGAAGCTTGGTCTGGATATGCTGAGACAACTGGGTTTACATCATGATTATGTTTTACTGCTCGTGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACGGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATGACTCCCAACATCTTGCTGCGGTTCTTAGATTCTTTACAGATTTCCTTCCTAGCTTCAAAAACACCTTTGACCATAATAGATACTGCCGCATACTGAATGAAATGAACTCATCCACGAATGTTTGA 2511 0.403 MKEKKNTASTLKRILVNCSSQAKAYGSCVAAKVPDIERDMCVKEFEALKSCMQNMLKKKEFSIISLRGRSYNFLQAKFLFYICHSLCLSGSDGLSHAYIQYPPLRFNVPGSSGLFYDDGNKFLLSPTADQVFSWKVGPFDPLSDPNTDSISEGPIIAIRYSLDTKVIAIQRSNHEIQFWDRETGGTFSHKCKPESESILGFFWTDSQQCDIVLVKTSGLDLYTYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISAADIVRLPRFEMVMAKSEANSKPVLASEDVFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTLSQSSGRESESSDGNVLSNHEAVTYANTWTFLVPDLVCDVANKLLWKFNLDLEVSYLFIYLFIYVPILYMNNPILQAISASSSEVPSILEFLQRRKLEANKAKQLCLGITRTLILEHRPVPVVAKAVNVLVTSYSHSIKTGSYLKGLKPENTSTSVVQNTGAEVSATETNVIGKSIVHESTRRVDSGSLNKASTVSSLDSEDESQSANLKHSSKEVQVEDEVNNEISLSKGAHSAYVMQSSLQSGQEESQLTSAAISPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRILPNVYVLIIQLLARNEHYAELGLFVLNKILEPSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYTVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPSFKNTFDHNRYCRILNEMNSSTNV 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01353 836 Pfam Colon cancer-associated protein Mic1-like 669 809 IPR009755 -
Gma03g01353 836 SUPERFAMILY WD40 repeat-like 111 233 IPR036322 GO:0005515
Gma03g01353 836 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 90 833 IPR040371 GO:0010506|GO:0035658
Gma03g01353 836 MobiDBLite consensus disorder prediction 575 608 - -
Gma03g01353 836 MobiDBLite consensus disorder prediction 578 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01353 Gma-Chr3 39695754 39706618 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01353 K24763 - gmx:100788425 1379.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01353 03 39695754 39706618 Gma03g01353 03 39695754 39706618 ECH
Gma19g01417 19 43449431 43457816 Gma03g01353 03 39695754 39706618 GST