Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01394 ATGAACAGCGCCATCTTCAAAGCTTCAAACAGCAACaatctccattcctctctcagggccgcactcttccattccacctctcccttgcaacgtaaacgccgcaatcattgggactccagagggagcaaccatacctcgagaaggtttagaagggtgcaagcgaaacacagagtaatgaacagtatcaatgattatgcagaatccctgtttcagAGCTGGAAGCAAGGTATTGATAGGGATGACCCATCATCAAGTCGAGGCACCTCATGGTTTAAAAAACAATATTCTGATGGGGCCTCTGGAAGGTACCGGAATAGCAATAAAGGATCAAGTCATCGGTACAGAAGAGATCCTTCTTTTTGTGAAGATGATTTTGATGTTGAAACCATTCTCCGTTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCAATGAGGAAAATCCTCAGTGGAGGAGGTCTGAACGCTTTTCTAATTTTGAGAAATCATGGAGCTGGAGATATCGAAACGAAAATGATTATGACTCTTCATCTGAGTCTGATAGTTTAGATTCAGATTTAGTTTCTGATAGATTAGCCCTTGGATTGAGTGCTTCAGGTTCCCTGAAACTTGAAGATGTAAAAAATGCGTACCGGGTCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGCTCTTCGAAGGCTATAGCAGAAGAGAAGTTCAAGCTTTGCAGTGCAGCTTATCAATCTTTATGTGATAAGCTGGCCTTGGATTAA 765 0.3176 MNSAIFKASNSNNLHSSLRAALFHSTSPLQRKRRNHWDSRGSNHTSRRFRRVQAKHRVMNSINDYAESLFQSWKQGIDRDDPSSSRGTSWFKKQYSDGASGRYRNSNKGSSHRYRRDPSFCEDDFDVETILRSAFGGNRFFYWSFINEENPQWRRSERFSNFEKSWSWRYRNENDYDSSSESDSLDSDLVSDRLALGLSASGSLKLEDVKNAYRVCALKWHPDRHQGSSKAIAEEKFKLCSAAYQSLCDKLALD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01394 254 Gene3D DnaJ domain 193 249 IPR036869 -
Gma19g01394 254 SMART dnaj_3 190 252 IPR001623 -
Gma19g01394 254 MobiDBLite consensus disorder prediction 82 107 - -
Gma19g01394 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 253 - -
Gma19g01394 254 MobiDBLite consensus disorder prediction 25 48 - -
Gma19g01394 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 253 - -
Gma19g01394 254 MobiDBLite consensus disorder prediction 31 45 - -
Gma19g01394 254 CDD DnaJ 196 249 IPR001623 -
Gma19g01394 254 Pfam DnaJ domain 197 250 IPR001623 -
Gma19g01394 254 SUPERFAMILY Chaperone J-domain 147 249 IPR036869 -
Gma19g01394 254 PRINTS DnaJ domain signature 195 213 IPR001623 -
Gma19g01394 254 PRINTS DnaJ domain signature 213 228 IPR001623 -
Gma19g01394 254 PRINTS DnaJ domain signature 232 252 IPR001623 -
Gma19g01394 254 ProSiteProfiles dnaJ domain profile. 191 252 IPR001623 -
Gma19g01394 254 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01394 Gma-Chr19 43237113 43241281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01394 - - gmx:100807880 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01394 19 43237113 43241281 Gma19g01394 19 43237113 43241281 ECH
Gma19g01394 19 43237113 43241281 Gma03g01330 03 39478456 39483214 GST