Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01330 ATGTCTCCAGTTCGTTTCGATCGATCGAGGAATTCGGGATATGTGGAAAGGCTTTTAGCTGTCATGACTCGTGATATCTTATTTGGTTTTCAGAAGTTTCCTTCAATGAGTTATTTCCGGACTTGTTTCACACATCTGCTGAAGGTAGAATGGTTGGCAACTGTTTGGAGAAGATTGTCAAGTAACAAGTTTGGGCCGTGCTCCTCACTTCCTCTAGAAGAGTATGTCATGGGATTTAGGATTGAGTTTTACAGAGATGATTTCGATGTTGAAACCAGTTTCCGTTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCAATGAGGAAAATCCTCAGTGGAGGAGATTAGCCCTTGGATTGAGTGTTTCTGGTCCACTGAAACTTGAAGATGTAAAAAATGCGTACCGGCCCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGCTCTTCCAAGGCTGTAGCAGAAGAGAAGTTCGAGCTTTGCAGTGCGGCTTATCAATCTTTATGTGATAGCCTGGCCCTGGATTAA 540 0.4333 MSPVRFDRSRNSGYVERLLAVMTRDILFGFQKFPSMSYFRTCFTHLLKVEWLATVWRRLSSNKFGPCSSLPLEEYVMGFRIEFYRDDFDVETSFRSAFGGNRFFYWSFINEENPQWRRLALGLSVSGPLKLEDVKNAYRPCALKWHPDRHQGSSKAVAEEKFELCSAAYQSLCDSLALD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01330 179 SMART dnaj_3 115 177 IPR001623 -
Gma03g01330 179 SUPERFAMILY Chaperone J-domain 123 175 IPR036869 -
Gma03g01330 179 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 118 178 - -
Gma03g01330 179 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 81 118 - -
Gma03g01330 179 Pfam DnaJ domain 123 175 IPR001623 -
Gma03g01330 179 ProSiteProfiles dnaJ domain profile. 116 177 IPR001623 -
Gma03g01330 179 CDD DnaJ 123 174 IPR001623 -
Gma03g01330 179 Gene3D DnaJ domain 116 174 IPR036869 -
Gma03g01330 179 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 118 178 - -
Gma03g01330 179 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 81 118 - -
Gma03g01330 179 PRINTS DnaJ domain signature 138 153 IPR001623 -
Gma03g01330 179 PRINTS DnaJ domain signature 120 138 IPR001623 -
Gma03g01330 179 PRINTS DnaJ domain signature 157 177 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01330 Gma-Chr3 39478456 39483214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01330 - - gmx:100807880 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01330 03 39478456 39483214 Gma03g01330 03 39478456 39483214 ECH
Gma19g01394 19 43237113 43241281 Gma03g01330 03 39478456 39483214 GST