Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01343 ATGAACAGCATCTCATCACTGACCCTTGATTCTCACGCAATATGCAACACTCAGCGCCCCATCTCCCTCCGCCAAGTTCGCCCCACTCGAAACGTCGTCGTATGCTCCGCGAAGCCCGTCGCGCCTCCCCCCACCAAGCTCGCTGCTGCCGACACCTCCGGCAGCCGCATCGGGGCGCTGAGCCAGGTCTCCGGCGTGCTAGGTTGCCAGTGGGGCGACGAGGGCAAAGGGAAACTCGTCGACATATTGGCCCAGCACTTCGAAATCGTTGCTCGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATCTATAATGCAGAAGGGAAAAAGTTTGCCCTACATCTTGTTCCTTCTGGTATTCTCAATGAGGATACTCTCTGTGTTATTGGGAATGGGGTTGTAGTGCACCTGCCGGGGTTGTTTAAAGAGATTGACGGTCTTGAATCAAATGGGGTCTCTTGCAAGGGAAGGATATTGATATCTGATCGCGCTCACCTGTTGTTTGATTTTCATCAAGTAGTGGATGGGCTAAGAGAAGCCGAGCTTGCTAAATCTTTCATTGGCACCACCAAGAGAGGCATTGGACCCTGCTACTCCAGCAAGGTTAACCGTAATGGCATCCGAGTGGGTGATTTGAGGCACATGGATACTTTCCCTCAGAAGCTTGATCTTATATTGTCAGATGCAGCATTGAGGTTCAAAGATTTTAACTATGGTCCAGATGTGCTCAGGGAAGAAGTTGAAAAATACAAGAGGTATGCCGAGAGGTTGGAGCCCTTTATTGCTGATACTGTGCTTGTCATGAATGATGCCATAGAACAAAAGAAGAAGATTTTGGTTGAAGGAGGACAAGCTACCATGTTGGACATTGATTTCGGAACTTATCCCTTTGTTACTTCTTCTAGCCCATCAGCAGGCGGGATATGCACTGGTCTTGGTATTGCTCCAAGGGTAGTTGGTGATTTAATAGGAGTGGTGAAGGCGTACACAACAAGAGTTGGTTCTGGTCCTTTTCCAACTGAAATTTTGGGTTCAGGAGGTGATCTCCTCAGATTTGCTGGGCAGGAGTTTGGCACAACTACTGGCCGTCCTCGACGGTGTGGCTGGCTCGATATAGTTGCTCTGAAATACTCATGTCAGATCAATGGTTTCTCATCGTTGAATCTTACCAAGCTGGATGTTTTATCAGATCTTGAAGAAATACAGTTGGGTGTCTCTTACAAACTTGCTGATGGCACCCCAATCAAATCATTCCCTTCAGATCTCCGTCTTCTTGAGCAACTGAAGGTGGAATATGAAGTACTTCCTGGATGGAAATATGATATTTCTTCCATAAGAAACTATTCTGACCTTCCAAAAGCTGCTAGGCTGTATGTGGAAAGGATAGAAGAACTTGTGGGGGTCCCTATTCACTACATTGCGGAAAATAATGTTGTACTAGTAACCCACCCAAATGCTTTTAGCTTTCAACTATCTACAAAATTGCATCATGGTTTTGTTGCTCTATGCAATCTTTATTCTCGCTTATCATTGCTTCGTGGAGAAATGCCAGCAATGGAGACACGGGCCAGTAATAAGAAAGCATCACATCTCCCTTTGCAGCAATTCATTTCTGTTACCACCCCTCTTCTTGATTTGGAAAAGGAAGCTGAGGTATCAAGCTCAGGAGTGTCTCAAGAGAGGGTGGTCATAGAAGATGCTGAGAAAGATGAATTCAAAGTCAATGACTGTCCCATAGAGCAAAACCAACCCTTTGAAAATCTCTTCGGTCTCGCGCCGATTATTACCCTCCCACTTGGGAAACTCATGGCTGCAACCCTTTCCACCAGACCAGTCCGAGTGCCATTCACAAAAGGGTCTTTTTTGTTGAATCCAGGGCCATTCTCTTTGAAGGAACATGTGCTGATCACCATCTTTGCTACCTCTGGATCTAGCGGTGTTTATGCAATTAACATCATCACAATTGTTAAGGCTTTTTATCATAGGAGCATCCATCCAGTAGCAGCTTATTTGTTAGCACTATCAACCCAAAGCTTGGGTATGGATGGGCTGGGATTTTTAGAAGATTCCTTGTTGACTCCCCTTATTTGTGCAGGTGTCTCTATTCAGGGCATTTCATGA 2121 0.4616 MNSISSLTLDSHAICNTQRPISLRQVRPTRNVVVCSAKPVAPPPTKLAAADTSGSRIGALSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVNRNGIRVGDLRHMDTFPQKLDLILSDAALRFKDFNYGPDVLREEVEKYKRYAERLEPFIADTVLVMNDAIEQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGSGGDLLRFAGQEFGTTTGRPRRCGWLDIVALKYSCQINGFSSLNLTKLDVLSDLEEIQLGVSYKLADGTPIKSFPSDLRLLEQLKVEYEVLPGWKYDISSIRNYSDLPKAARLYVERIEELVGVPIHYIAENNVVLVTHPNAFSFQLSTKLHHGFVALCNLYSRLSLLRGEMPAMETRASNKKASHLPLQQFISVTTPLLDLEKEAEVSSSGVSQERVVIEDAEKDEFKVNDCPIEQNQPFENLFGLAPIITLPLGKLMAATLSTRPVRVPFTKGSFLLNPGPFSLKEHVLITIFATSGSSGVYAINIITIVKAFYHRSIHPVAAYLLALSTQSLGMDGLGFLEDSLLTPLICAGVSIQGIS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01343 706 CDD AdSS 62 473 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma19g01343 706 SMART adenylsucc_synt 63 479 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma19g01343 706 Hamap Adenylosuccinate synthetase [purA]. 1 508 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma19g01343 706 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 70 77 IPR018220 GO:0005525
Gma19g01343 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 474 IPR027417 -
Gma19g01343 706 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 326 477 IPR042111 -
Gma19g01343 706 TIGRFAM purA: adenylosuccinate synthase 66 474 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma19g01343 706 Pfam Adenylosuccinate synthetase 66 474 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma19g01343 706 ProSitePatterns Adenylosuccinate synthetase active site. 193 204 IPR033128 -
Gma19g01343 706 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 162 260 IPR042110 -
Gma19g01343 706 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 66 325 IPR042109 -
Gma19g01343 706 Pfam OPT oligopeptide transporter protein 593 682 IPR004813 GO:0035673
Gma19g01343 706 PANTHER ADENYLOSUCCINATE SYNTHETASE 17 474 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma19g01343 706 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 17 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01343 Gma-Chr19 42698246 42703356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01343 591 692 Organic Solute Cotransporters AT4G26590 58.824 1.47e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01343 K01939 - gmx:100792329 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01343 19 42698246 42703356 Gma19g01343 19 42698246 42703356 ECH
Gma19g01343 19 42698246 42703356 Gma03g01287 03 38952570 38956814 GST