Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01287 ATGAACACCATCTCATCACTGACCCTTGATTCTCACGCAATATGCAACCCTCAGCGCAGCATCTCCCTCCGCCAAGTTCGCCCCACCACTCGAAACGTCGTCGTGTGCTCCGCGAAGCCCGTCGCGCCTCCCCCCACCAAGCTCGCCGCCGCCGACACCTCCGGCTGCCGCATCGGCGAACTGAGCCAGGTCTCCGGCGTGCTTGGCTGCCAGTGGGGCGACGAGGGCAAAGGGAAGCTCGTTGACATATTGGCCCAACACTTCGAAATCGTTGCTCGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATTTACAACGCAGAAGGGAAAAAGTTTGCTCTTCATCTTGTTCCTTCTGGTATTCTCAATGAAGATACTCTGTGTGTTATTGGGAATGGAGTTGTAGTGCACCTGCCGGGGTTGTTTAAGGAGATTGACGGTCTTGAATCGAACGGGGTCTCTTGCAAGGGAAGGATATTGATATCTGATCGCGCTCACCTGTTGTTTGATTTCCACCAAGTGGTGGATGGGCTAAGAGAAGCGGAGCTTGCTAAATCCTTCATTGGCACCACAAAGAGAGGCATTGGACCCTGCTACTCCAGCAAGGTTAACCGTAATGGCCTCCGAGTGGGTGATTTGAGGCACATGGATACTTTCCCTCAGAAGCTTGATCTTATATTGTCAGATGCAGCATTGAGGTTCAAAGATTTTAACTATGGCCCATATATGCTCAGGGAAGAAGTTGAAAAATACAAGAGGTATGCCGAGAGGTTGGAGCCCTTTATTGCTGATACTGTGCTTGTCATGAATGACGCCATAGAACAAAAGAAGAAGATTTTGGTTGAAGGAGGACAAGCTACCATGTTGGACATTGATTTTGGAACTTATCCCTTTGTTACTTCTTCTAGCCCATCAGCTGGTGGGATATGCACTGGTCTTGGTATTGCTCCAAGGGTACTTGGTGATTTAATAGGAGTGGTGAAGGCATACACTACAAGAGTTGGTTCTGGTCCTTTTCCAACTGAAATTTTGGGTTCAGGAGGTGACCTCCTCAGATTTGCTGGGCAGGAGTTTGGCACAACTACTGGCCGCCCTCGACGGTGTGGCTGGCTCGATTTAGTTGCACTGAAATACTCTTGTCAGATCAACGGTTTCTCATCGTTGAATCTTACCAAGCTAGATGTTTTATCAGATCTTGAAGAAATACAGTTAGGTGTCTATTACAAACTTGCTGATGGCACCCCAATCAAATCATTCCCTTCAGATCTTCGTCTTCTTGAGCAACTGAAGGTGGAATATGAAGTACTTCCTGGATGGAAATCTGATATATCTTCCATAAGAAACTATTCTGACCTTCCAAAGGCTGCAAGGCTGTATGTGGAAAGGATAGAAGAACTTGTGGGGGTCCCTATTCACTACATTGGTATTGGGCCTGGACGTGATGCTCTCATATACAAATGA 1461 0.4798 MNTISSLTLDSHAICNPQRSISLRQVRPTTRNVVVCSAKPVAPPPTKLAAADTSGCRIGELSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVNRNGLRVGDLRHMDTFPQKLDLILSDAALRFKDFNYGPYMLREEVEKYKRYAERLEPFIADTVLVMNDAIEQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVLGDLIGVVKAYTTRVGSGPFPTEILGSGGDLLRFAGQEFGTTTGRPRRCGWLDLVALKYSCQINGFSSLNLTKLDVLSDLEEIQLGVYYKLADGTPIKSFPSDLRLLEQLKVEYEVLPGWKSDISSIRNYSDLPKAARLYVERIEELVGVPIHYIGIGPGRDALIYK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01287 486 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 67 326 IPR042109 -
Gma03g01287 486 ProSitePatterns Adenylosuccinate synthetase active site. 194 205 IPR033128 -
Gma03g01287 486 SMART adenylsucc_synt 64 485 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma03g01287 486 PANTHER ADENYLOSUCCINATE SYNTHETASE 16 486 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma03g01287 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 485 IPR027417 -
Gma03g01287 486 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 327 486 IPR042111 -
Gma03g01287 486 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 163 261 IPR042110 -
Gma03g01287 486 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 16 486 - -
Gma03g01287 486 TIGRFAM purA: adenylosuccinate synthase 67 484 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma03g01287 486 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 71 78 IPR018220 GO:0005525
Gma03g01287 486 CDD AdSS 63 485 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma03g01287 486 Hamap Adenylosuccinate synthetase [purA]. 1 486 IPR001114 GO:0000166|GO:0004019|GO:0006164
Gma03g01287 486 Pfam Adenylosuccinate synthetase 67 484 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01287 Gma-Chr3 38952570 38956814 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01287 K01939 - gmx:100811618 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01287 03 38952570 38956814 Gma03g01287 03 38952570 38956814 ECH
Gma19g01343 19 42698246 42703356 Gma03g01287 03 38952570 38956814 GST