Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01311 ATGATTGTTAAAAGGTTGAGGAGCAACAATGGGAGTTCTATTGGCTCTGCAACCTTGTACTCCCCATACCTTGTTTCTTCTTCTTCTTCTCTCTCTCTCTCTCACAAACCAAACCATCCTCACGCATTGAGATCTCAGCCTTGGTCTCGTGCTGTCATCGTTTTTTCTGACTCAAGTGTCTTGGCTGCTGATCTGGGTCGGTCCCATATTGTGGTGTTAGCTGAAAAGACAGGAGTTGGTCAAAAAGTAGGCACTGAAATATGGAGGATTGAGGATTTTCAGCCAGTTCCATTGCCCAGATCTGAATATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGTGCTTATTTGTATGACATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCAGCCATTAAAAATGTTGAACTCGATGCATCTCTTGGAGGACGTGCAGTGCAACACAGGGAAATTCAAGGGCATGAATCTGACAAATTTTTGTCCTACTTTAAGCCATGTATAATTCCATTAGAGGGGGGTATCGCATCTGGATTTAAAAAACCTGAAGAAGAGGAGTTTGAAACACGTTTATATGTATGCAGAGGAAAAAGAGTTGTCAGAATAAAACAGGCACAATTTTTGCTTATGCAGGTCCCTTTTGCACGGTCTTCATTGAATCATGATGATGTATTCATCCTAGACACTCAGAATAAGATTTATCAATTCAATGGTGCAAACTCCAATATCCAGGAAAGAGCCAAGGCTCTGGAAGTTATACAGTTGTTGAAGGAAAAACATCATGAGGGAAAATGTGACGTTGCAATTGTTGATGATGGCAAGCTGGATACTGAGTCAGACTCAGGTGAATTTTGGGTTCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATTAGTGAGGATGATATCGTTCCAGAGACCATTCCTGCTCAACTCTATAGTATTGCTGATGGTGAGGTCAAGCCTGTGGAAGGTGAACTTTCAAAATCACTGCTGGAGAACTACAAATGCTATCTATTGGACTGTGGTACTGAGGTATTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGATCGAAAAGCAGCTTGTCAAGCAGCTGAGGAGTTTGTCGCAAGTCAAAAAAGGCCGAAATCTACAAGGATTACCAGAATCATTCAAGGTTATGAGACACATTCTTTTAAGTCCAACTTTGATTTTTGGCCATCAGGATCTGCTACTAACAGTGCTGACGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAGCAAGGTATGGGTGTGAAAGGGGTGACAAAAACTACCCCAGTTGTTGAGGACATTCCACCTCTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCAAATCAGTGGAAGTGCTAAGACTCCCTTATCTAAGGAGGATATTGGTAAATTTTATAGTGGAGATTGTTACATAGTACTGTACACTTATCACTCTAGCGAGAGAAAGGAAGACTACTACTTGTGTTGTTGGTTTGGAAAAGACAGCATTGAGGAGGACCAAAGAATGGCTATTCGATTGGCTAACTCAATGTTCAACTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGATGGTAAAGAGCCACCACAGTTTATTGCCCTTTTCCATCCAATGGTGGTCCTCAAGGGAGGCTTGAGCTCTGGTTACAAAAAATTTATAGCAGATAAAGGTTTGCCGGATGAGACATACGCAGCAGAGAGTGTTGCACTTATTCGGATTTCTGGAACATCCATTCATAATAATAAAGTGGTGCAAGTAGATGCAGTGGCAGCATTGCTGAACTCTACCGAGTGTTTTGTCCTGCAATCTGGCTCAGCTGTTTTTACATGGCATGGGAATCAATGTTCCCTTGAGCAGCAGCAGCTTGCAGCAAAAGTTGCTGAGTTTTTAAGGCCAGGAGTTTCTTTAAAGCTTGCTAAAGAAGGAACAGAAACCTCAACTTTCTGGTTTGCACTTGGAGGAAAACAAAGTTACACCAGCAAAAATGTCACTAATGACATTGTCAGAGACCCACATTTGTTCACTTTATCTTTTAATAGAGGAAAGTTACAGGTAGAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAAGATATCCTGATCCTTGACACGCACACAGAAGTGTTTGTTTGGATTGGTCAGTGTGTGGACCCAAAAGAAAAGCAAAAAGCTTTTGAAATTGCCCAGAAATACATAGATAAGGCTGCATCTCTGGAAGGACTATCTCCTCATGTACCACTATACAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCTTGGGATCATGCAAAAGCTATGGTGCCAGGGAACTCATTCCAGAAAAAGGTGACATTACTCTTTGGAACTGGCCATCCTGTAGAGGAAAAGTCTAATGGGTCAAGTCAAGGAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTAAATAATGCATTCAATTCATCTCCTGAGACAACGTCCAGTGCGGATAAGTTGAATGGGTTAAATCGAGGTGGACCGAGACAAAGGGCAGAAGCCTTAGCAGCCTTAAACTCTGCATTTAATTCATCATCTGGAACCAAAGTTTATACTCCAAGGCCATCTGGAAGAGGTCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTCTCTTCAGTTCTTACTGCTGAAAAGAAGAAAACTTCACCTGAAACTTCTCCTGTGGCTAGCACTAGTCCTGTAGTGGAAAGTAGCAACTTTGACACTAAAAGTGAAAGTGCCCCTTCTGAAACGGAAGTTGTTGAAGAAGTTGCAGATGTCAAAGAGACAGAAGAAGTTGCCCCTGAAGCTGGTACCAATGGGGATTCAGAACAACCAAAACAAGAAAATGTGGAGGATGGAAGAAATGACAGTGAAAATAATAATCAAAATGTCTTCAGTTATGAGCAATTAAAGACTAAATCTGGTAGTGTTGTGTCTGGAATTGATCTTAAACAGAGAGAGGCTTATCTGTCAGACAAAGAGTTCGAAACTGTATTTGGAATGGCCAAAGAAGCATTCTCTAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAGGAAAGTGGATTTGTTCTAG 3168 0.4201 MIVKRLRSNNGSSIGSATLYSPYLVSSSSSLSLSHKPNHPHALRSQPWSRAVIVFSDSSVLAADLGRSHIVVLAEKTGVGQKVGTEIWRIEDFQPVPLPRSEYGKFYMGDSYIILQTTQGKGGAYLYDIHFWIGKDTSQDEAGTAAIKNVELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGIASGFKKPEEEEFETRLYVCRGKRVVRIKQAQFLLMQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQLLKEKHHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIVPETIPAQLYSIADGEVKPVEGELSKSLLENYKCYLLDCGTEVFVWVGRVTQVEDRKAACQAAEEFVASQKRPKSTRITRIIQGYETHSFKSNFDFWPSGSATNSADEGRGKVAALLKQQGMGVKGVTKTTPVVEDIPPLLEGGGKMEVWQISGSAKTPLSKEDIGKFYSGDCYIVLYTYHSSERKEDYYLCCWFGKDSIEEDQRMAIRLANSMFNSLKGRPVQGRIFDGKEPPQFIALFHPMVVLKGGLSSGYKKFIADKGLPDETYAAESVALIRISGTSIHNNKVVQVDAVAALLNSTECFVLQSGSAVFTWHGNQCSLEQQQLAAKVAEFLRPGVSLKLAKEGTETSTFWFALGGKQSYTSKNVTNDIVRDPHLFTLSFNRGKLQVEEVYNFSQDDLLTEDILILDTHTEVFVWIGQCVDPKEKQKAFEIAQKYIDKAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKAMVPGNSFQKKVTLLFGTGHPVEEKSNGSSQGGGPRQRAEALAALNNAFNSSPETTSSADKLNGLNRGGPRQRAEALAALNSAFNSSSGTKVYTPRPSGRGQGSQRAAAVAALSSVLTAEKKKTSPETSPVASTSPVVESSNFDTKSESAPSETEVVEEVADVKETEEVAPEAGTNGDSEQPKQENVEDGRNDSENNNQNVFSYEQLKTKSGSVVSGIDLKQREAYLSDKEFETVFGMAKEAFSKLPRWKQDMLKRKVDLF 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01311 1055 SMART VILL_6 695 790 IPR007122 GO:0051015
Gma19g01311 1055 SMART VILL_6 463 561 IPR007122 GO:0051015
Gma19g01311 1055 SMART VILL_6 83 181 IPR007122 GO:0051015
Gma19g01311 1055 SMART VILL_6 322 415 IPR007122 GO:0051015
Gma19g01311 1055 SMART VILL_6 209 305 IPR007122 GO:0051015
Gma19g01311 1055 SMART VILL_6 589 678 IPR007122 GO:0051015
Gma19g01311 1055 Pfam Gelsolin repeat 603 654 IPR007123 -
Gma19g01311 1055 Pfam Gelsolin repeat 225 288 IPR007123 -
Gma19g01311 1055 Pfam Gelsolin repeat 335 408 IPR007123 -
Gma19g01311 1055 Pfam Gelsolin repeat 93 175 IPR007123 -
Gma19g01311 1055 Pfam Gelsolin repeat 709 784 IPR007123 -
Gma19g01311 1055 Pfam Gelsolin repeat 480 555 IPR007123 -
Gma19g01311 1055 MobiDBLite consensus disorder prediction 880 995 - -
Gma19g01311 1055 Gene3D Severin 317 430 IPR029006 -
Gma19g01311 1055 CDD gelsolin_S1_like 78 188 - -
Gma19g01311 1055 CDD gelsolin_S6_like 693 791 - -
Gma19g01311 1055 MobiDBLite consensus disorder prediction 844 866 - -
Gma19g01311 1055 SUPERFAMILY Actin depolymerizing proteins 454 599 - -
Gma19g01311 1055 CDD gelsolin_S5_like 590 680 - -
Gma19g01311 1055 MobiDBLite consensus disorder prediction 880 895 - -
Gma19g01311 1055 SUPERFAMILY Actin depolymerizing proteins 581 686 - -
Gma19g01311 1055 Pfam Villin headpiece domain 1020 1055 IPR003128 GO:0003779|GO:0007010
Gma19g01311 1055 Gene3D Villin headpiece domain 979 1055 IPR036886 GO:0003779|GO:0007010
Gma19g01311 1055 Gene3D Severin 686 805 IPR029006 -
Gma19g01311 1055 CDD gelsolin_S2_like 203 303 - -
Gma19g01311 1055 SUPERFAMILY Actin depolymerizing proteins 667 789 - -
Gma19g01311 1055 Gene3D Severin 460 592 IPR029006 -
Gma19g01311 1055 MobiDBLite consensus disorder prediction 813 832 - -
Gma19g01311 1055 Gene3D Severin 593 684 IPR029006 -
Gma19g01311 1055 PRINTS Gelsolin family signature 508 526 IPR007122 GO:0051015
Gma19g01311 1055 PRINTS Gelsolin family signature 541 561 IPR007122 GO:0051015
Gma19g01311 1055 PRINTS Gelsolin family signature 745 764 IPR007122 GO:0051015
Gma19g01311 1055 PRINTS Gelsolin family signature 604 624 IPR007122 GO:0051015
Gma19g01311 1055 PRINTS Gelsolin family signature 664 683 IPR007122 GO:0051015
Gma19g01311 1055 PRINTS Gelsolin family signature 394 415 IPR007122 GO:0051015
Gma19g01311 1055 PRINTS Gelsolin family signature 482 498 IPR007122 GO:0051015
Gma19g01311 1055 PRINTS Gelsolin family signature 716 738 IPR007122 GO:0051015
Gma19g01311 1055 PANTHER VILLIN 77 1055 IPR007122 GO:0051015
Gma19g01311 1055 SUPERFAMILY Actin depolymerizing proteins 78 212 - -
Gma19g01311 1055 SUPERFAMILY Actin depolymerizing proteins 193 308 - -
Gma19g01311 1055 MobiDBLite consensus disorder prediction 945 965 - -
Gma19g01311 1055 ProSiteProfiles Headpiece (HP) domain profile. 990 1055 IPR003128 GO:0003779|GO:0007010
Gma19g01311 1055 PANTHER VILLIN-3-LIKE ISOFORM X1 77 1055 - -
Gma19g01311 1055 Gene3D Severin 196 313 IPR029006 -
Gma19g01311 1055 SUPERFAMILY Actin depolymerizing proteins 294 417 - -
Gma19g01311 1055 SMART VHP_1 1020 1055 IPR003128 GO:0003779|GO:0007010
Gma19g01311 1055 MobiDBLite consensus disorder prediction 912 944 - -
Gma19g01311 1055 CDD gelsolin_S3_like 325 413 - -
Gma19g01311 1055 CDD gelsolin_S4_like 457 558 - -
Gma19g01311 1055 SUPERFAMILY VHP, Villin headpiece domain 987 1055 IPR036886 GO:0003779|GO:0007010
Gma19g01311 1055 Gene3D Severin 72 195 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01311 Gma-Chr19 42368622 42382954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01311 - - gmx:100787208 1876.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01311 19 42368622 42382954 Gma03g01266 03 38682007 38692324 GST
Gma19g01311 19 42368622 42382954 Gma02g01735 02 37775019 37786487 PCT
Gma02g01735 02 37775019 37786487 Gma19g01311 19 42368622 42382954 PCT