Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01266 ATGTCTAGTGCTACAAAAGTGTTGGATCCAGCATTCCAGGGAGTTGGTCAAAAAGTAGGGACTGAAATATGGAGGATTGAGGATTTTCAGCCAGTTCCATTGCCCAGACCTGATTATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGTGCTTATTTGTATGATATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCAGCCATTAAAACTGTTGAACTCGATGCGTCTCTTGGAGGACGTGCAGTGCAACACAGGGAAATTCAAGGGCATGAATCCGACAAGTTTTTGTCATACTTTAAGCCATGTATAATACCATTAGAGGGAGGTGTTGCATCGGGATTTAAAAAACCTGAAGAAGAGGAGTTTGAAACACGTTTGTATGTATGCAGAGGAAAAAGAGTTGTTCCTTTTGCACGGTCTTCACTGAATCATGATGATGTATTCATCCTAGACACTCAGAATAAGATTTATCAATTCAATGGTGCAAACTCCAATATCCAGGAAAGAGCCAAGGCTCTGGAAGTTATTCAGTTGTTGAAGGAAAAGTATCATGAGGGAAAATGCGACGTTGCAATTGTTGATGATGGAAAGCTGGATACTGAGTCAGACTCAGGTGAATTTTGGGTTCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGATAATTAGTGAGGATGATATTGTTCCAGAGACCATTCCTGCTCAACTCTATAGTATTGCTGATGGTGAGGCCAAGCCTGTGGAAGGTGAACTTTCAAAATCACTGCTGGAGAACTACAAATGCTATCTATTGGACTGTGGAGCTGAGGTATTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAACGAAAAGCAGCATGTCAAGCAGCTGAGGAGTTTCTCACAAGTCAAAAAAGGCCGAAATCTACAAGGATTACCAGAATTATTCAAGGTTATGAGACACATTCGTTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTACTACTGGTGCTGATGAAGGAAGAGGAAAAGTTGCAGCTTTGCTTAAGCAACAAGGTATGGGTGTGAAAGGGGTGACAAAAACTACCTCAGTTGTTGAGGAAATTCCACCTCTACTTGAAGGAGGTGGAAAGATGGAGGTATGGCAAATCAATGGAAGTGCTAAGACTCCATTACCTAAGGAGGATATCGGTAAATTTTATAGTGGAGATTGTTACATAGTACTGTACACTTATCACTCTAGTGAGAGGAAGGAGGACTACTACTTGTGTTGTTGGTTTGGAAAAGACAGCACTGAGGAGGACCAAAGAATGGCTATTCGATTGGCTAACACAATGTTCAACTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGATGGTAAAGAGCCACCACAGTTTATTGCTCTTTTCCATCCAATGGTGGTCCTCAAGGGAGGCTTGAGCTCTGGTTACAAAAAATTGATAGCAGATAAAGGTTTGCCAGATGAGACATACACAGCAGAGAGTGTTGCATTTATTCGAATTTCTGGAACATCCACTCATAATAATAAAGTGGTGCAAGTAGATGCAGTGGCAGCATTGCTGAATTCTACCGAGTGTTTTGTCCTGCAATCTGGCTCAGCTGTTTTTACATGGCATGGGAATCAATGTTCCCTTGAGCAGCAGCAGCTTGCTGCAAAAGTTGCTGAATTTTTAAGGCCAGGAGTTGCTTTAAAGCTTGCTAAAGAAGGAACAGAAACCTCAACTTTCTGGTTTGCACTTGGAGGGAAACAAAGTTACAACAACAAAAAAGTCACTAATGACATTGTCAGAGACCCCCATTTGTTCACTTTCTCTTTTAATAGAGGTAAAATTTCTTGTAATAAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATCCTGATCCTTGACACACACGCAGAAGTGTTTGTATGGATTGGTCAGTGTGTGGACCCAAAAGAAAAGCAAAATGCTTTTGAAATTGCCCAGAAATACATAGATAAGGCTGCATCTCTGGAGGGACTATCTCCTCATGTACCACTATACAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCTTGGGATCATACAAAAGCTATGGTTCCAGGAAACTCATTCCAGAAAAAGGTGACATTACTCTTTGGAATTGGCCATCCTGTAGAGGAAAAGTCTAATGGGTCAAGTCAAGGAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTAAATAATGCATTCAATTCATCTCCTGAGGCAACATCCAGTGCGGATAAGTCGAATGGGCTAAGTCGAGGAGGACCAAGACAAAGGGCTGAAGCCTTAGCAGCCTTAAACTCTGCATTTAATTCATCATCTGGAACCAAAGTTTATACTCCTAGGCCATCTGGAAGAGGTCAAGGATCACAAAGAGCCGCCGCAGTAGCTGCTCTCTCTTCAGTTCTTACTGCTGAAAAGAAGAAAACTTCACCTGAAACTTCTCCTGTGGCTAGCACTAGTCCTGTAGTGGAGAATAGCAACTTTGATACTAAAAGTGAAAGTGCCCCTTCTGAAAAGGAAATTGTTGAAGAAGTTACAGAAGTCAAGGAGACAGAAGTTGTTGCCCTTGAAACTGGTACCAATGGGGATTCAGAACAACCAAAACAAGAAAATGTGGAGGATGGAGGAAATGACAGTGAAAATAATAATCAAAATTTCTTCAGTTATGAGCAGTTAAAGACCAAATCTGGTAGTGTTGTGTCTGGAATTGATCTTAAACGGAGAGAGGCCTATCTGTCAGACAAAGAGTTCCAAGCTGTATTTGGAATGGCCAAAGATGCATTCTCCAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAGAAAAGTGGATTTGTTCTAG 2943 0.4169 MSSATKVLDPAFQGVGQKVGTEIWRIEDFQPVPLPRPDYGKFYMGDSYIILQTTQGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYVCRGKRVVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQLLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKIISEDDIVPETIPAQLYSIADGEAKPVEGELSKSLLENYKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFLTSQKRPKSTRITRIIQGYETHSFKSNFDSWPSGSATTGADEGRGKVAALLKQQGMGVKGVTKTTSVVEEIPPLLEGGGKMEVWQINGSAKTPLPKEDIGKFYSGDCYIVLYTYHSSERKEDYYLCCWFGKDSTEEDQRMAIRLANTMFNSLKGRPVQGRIFDGKEPPQFIALFHPMVVLKGGLSSGYKKLIADKGLPDETYTAESVAFIRISGTSTHNNKVVQVDAVAALLNSTECFVLQSGSAVFTWHGNQCSLEQQQLAAKVAEFLRPGVALKLAKEGTETSTFWFALGGKQSYNNKKVTNDIVRDPHLFTFSFNRGKISCNKEVYNFSQDDLLTEDILILDTHAEVFVWIGQCVDPKEKQNAFEIAQKYIDKAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHTKAMVPGNSFQKKVTLLFGIGHPVEEKSNGSSQGGGPRQRAEALAALNNAFNSSPEATSSADKSNGLSRGGPRQRAEALAALNSAFNSSSGTKVYTPRPSGRGQGSQRAAAVAALSSVLTAEKKKTSPETSPVASTSPVVENSNFDTKSESAPSEKEIVEEVTEVKETEVVALETGTNGDSEQPKQENVEDGGNDSENNNQNFFSYEQLKTKSGSVVSGIDLKRREAYLSDKEFQAVFGMAKDAFSKLPRWKQDMLKRKVDLF 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01266 980 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Gma03g01266 980 PANTHER VILLIN-3-LIKE ISOFORM X1 1 980 - -
Gma03g01266 980 SUPERFAMILY VHP, Villin headpiece domain 911 980 IPR036886 GO:0003779|GO:0007010
Gma03g01266 980 PRINTS Gelsolin family signature 432 450 IPR007122 GO:0051015
Gma03g01266 980 PRINTS Gelsolin family signature 641 663 IPR007122 GO:0051015
Gma03g01266 980 PRINTS Gelsolin family signature 406 422 IPR007122 GO:0051015
Gma03g01266 980 PRINTS Gelsolin family signature 528 548 IPR007122 GO:0051015
Gma03g01266 980 PRINTS Gelsolin family signature 318 339 IPR007122 GO:0051015
Gma03g01266 980 PRINTS Gelsolin family signature 465 485 IPR007122 GO:0051015
Gma03g01266 980 PRINTS Gelsolin family signature 588 607 IPR007122 GO:0051015
Gma03g01266 980 PRINTS Gelsolin family signature 670 689 IPR007122 GO:0051015
Gma03g01266 980 PANTHER VILLIN 1 980 IPR007122 GO:0051015
Gma03g01266 980 Gene3D Severin 5 132 IPR029006 -
Gma03g01266 980 MobiDBLite consensus disorder prediction 769 784 - -
Gma03g01266 980 CDD gelsolin_S2_like 139 227 - -
Gma03g01266 980 SMART VHP_1 945 980 IPR003128 GO:0003779|GO:0007010
Gma03g01266 980 MobiDBLite consensus disorder prediction 769 792 - -
Gma03g01266 980 CDD gelsolin_S4_like 381 482 - -
Gma03g01266 980 Gene3D Severin 133 241 IPR029006 -
Gma03g01266 980 SUPERFAMILY Actin depolymerizing proteins 218 340 - -
Gma03g01266 980 ProSiteProfiles Headpiece (HP) domain profile. 915 980 IPR003128 GO:0003779|GO:0007010
Gma03g01266 980 SUPERFAMILY Actin depolymerizing proteins 129 232 - -
Gma03g01266 980 CDD gelsolin_S6_like 617 716 - -
Gma03g01266 980 Pfam Villin headpiece domain 945 980 IPR003128 GO:0003779|GO:0007010
Gma03g01266 980 Gene3D Severin 243 350 IPR029006 -
Gma03g01266 980 MobiDBLite consensus disorder prediction 867 885 - -
Gma03g01266 980 Pfam Gelsolin repeat 260 332 IPR007123 -
Gma03g01266 980 Pfam Gelsolin repeat 400 479 IPR007123 -
Gma03g01266 980 Pfam Gelsolin repeat 29 111 IPR007123 -
Gma03g01266 980 Pfam Gelsolin repeat 527 578 IPR007123 -
Gma03g01266 980 Pfam Gelsolin repeat 149 212 IPR007123 -
Gma03g01266 980 Pfam Gelsolin repeat 636 709 IPR007123 -
Gma03g01266 980 MobiDBLite consensus disorder prediction 837 866 - -
Gma03g01266 980 SUPERFAMILY Actin depolymerizing proteins 506 608 - -
Gma03g01266 980 MobiDBLite consensus disorder prediction 805 820 - -
Gma03g01266 980 Gene3D Severin 384 513 IPR029006 -
Gma03g01266 980 SUPERFAMILY Actin depolymerizing proteins 591 714 - -
Gma03g01266 980 MobiDBLite consensus disorder prediction 805 918 - -
Gma03g01266 980 CDD gelsolin_S5_like 514 604 - -
Gma03g01266 980 Gene3D Villin headpiece domain 904 980 IPR036886 GO:0003779|GO:0007010
Gma03g01266 980 Gene3D Severin 609 729 IPR029006 -
Gma03g01266 980 CDD gelsolin_S1_like 12 124 - -
Gma03g01266 980 CDD gelsolin_S3_like 249 338 - -
Gma03g01266 980 SUPERFAMILY Actin depolymerizing proteins 377 523 - -
Gma03g01266 980 Gene3D Severin 514 608 IPR029006 -
Gma03g01266 980 SMART VILL_6 139 229 IPR007122 GO:0051015
Gma03g01266 980 SMART VILL_6 618 715 IPR007122 GO:0051015
Gma03g01266 980 SMART VILL_6 246 339 IPR007122 GO:0051015
Gma03g01266 980 SMART VILL_6 387 485 IPR007122 GO:0051015
Gma03g01266 980 SMART VILL_6 19 117 IPR007122 GO:0051015
Gma03g01266 980 SMART VILL_6 515 602 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01266 Gma-Chr3 38682007 38692324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01266 - - gmx:100803795 1863.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01311 19 42368622 42382954 Gma03g01266 03 38682007 38692324 GST
Gma03g01266 03 38682007 38692324 Gma02g01735 02 37775019 37786487 PCT
Gma02g01735 02 37775019 37786487 Gma03g01266 03 38682007 38692324 PCT