Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01292 ATGGAATTGGTGTTTGTATCCGTGATGAACGTGGAAATTTCAAAATCTGCCAGCATATATACTGCAATCATATGGACCATCCAGAAACAGTTCCATATAACATCATCTTTGATCAGCTCGACTGCAAAACAAGTATCAGATGACATCCTCTCTTCGTCTTCTACAAATTCTGAGTTTAGGGTTTTTTACTGTCTTTACCACCTGAAAAAAATCGACGGCCCACGAACTAGCCCAGTCAAACAGGGCCCCACCAGAACCCCGGGCCCACGTCGCAGTGTAGGAAATGACCACACTACCCTCAGTCTCGCCGCTTTCATTTTCAGTTGCAGCCTTTTTCGCTGCAACACAGAACACACACTCACTCTTGTTATTCGCTCTTTCTTCTTCTTCTCTGAATTTGTGGACAATCGCAAAACCCTAGGCACTCTCACTCGCATTTCACGGACTCGTTTTCCAGGATATAGTAGTAGTTACCTACTGCAGTTCATGGCTTGGGATCTCTGGGGTTCGTCCTATGCCCAAGTTGCGAGTGGTAGTAATTACTGGTCACAGCATCCTGAATGTGACTTCTACTTTGGGTGTGGCCGTGATTTGATAGAGGAGGATGCCTTGAATGTGGAATCCTGTGTCCGGGTTTTGAGAATTTTGATCACCAAGGCAGATACCGAGATCGAGGAACTTGAAAGGGACCTCTTGTTTCTTCAGAATGAATTGGCCTGCGCCGAGCATGAAAAATGGCCTGATATATGCCGTGCTGTTCTCACTGAGAGAATCAACCGGCTTGATGTGGCGGTTAGCACTTTGAAGAATGATCATACTGATGATGCGGAGATGCAGCCACTGTTAGATAGTGAACCTGCTGAGACACTTCATGAAATACTTGCTCAGTCTCTGGATATGAAAATGTTGAGTCCAATTGTGAATCTAGACAAGGATTCTAGCACTTTTGATTCTAATATAATCATTAAGGGGGAAGAAAAAGAACTCCATGGAACCTCTGAAAGCTCTGGAAGCTCAGAACTTCTTTTGGAGCTTCATGGAAAGAGATCAGATAATCCCGAAAAGATTGAGGAATTGTCTGAAAAATCTCTTGTTAGAAGTCCTGATTTGGGGGCTATCATCCATGCacctgatcactctgttgagacaaaattatcagaaacatttgataatgacgttactggaaatgaagaagtcagaagaagtcaacacattagtacagatataggtcaagtgttggatttgttttctgccaaagacgatgaaaacattccaaatggagtcaagaaaggaaatgaatttgtcaaagaaaaagatgttagctcagatgattttagacctgcaattggtgtcaaggggaggaaagagtatcctcattccaggttagttacttcacaacaacgaaaaggtgaacctgatcactctgattggatgaaattatcagaaacatctgatagtaaacttgctggaaatgaagaggtcggaagaagccaactcattaatacagatataggtcaaatgttggatttgttttccgccaaagacaatggaaatattccaagtgaagtcaaggaagaaaatgaagttgtcaaacaaaaagatgttagctcagatgattttagacctgcaattggcatcaaggggagggaagagtatcctcattccagattagctacttcacaacaaaaaagtggacctgaatctcctgatcactctgattggatgaaattatcagaaacatctgataataaagttgctggaaatgatgttgaaagaagccaactcaatgatacagatataggtcaaatcttggatgtgttttctgctgaagacaacgaaaatattccaagtgaagcccagaaagaaaatgaatttgtcaaagatgttagctcagatgattccagacctgcaactgacatcaaagtgaggaaaaagtatcctaattccagattagctacttcacctcaacgaaaaTGTAGAAATTCTAATTTAGACAAAAAGCTATGTGATATTGCTCCAAAAACTGCACGGAAGGCCTACAAGAAACAGTCCAAGGTTGCTCCAGATAAAGATTTGAACTCCATGGATTTACCTTTACAAGTATTTTATCCTCAAACATTTTGTAGCGCCAATACTGAATTTTGCTCCTTTAAAGGAAGTAATGGGATTCAAACCAAGAGTGCCCTGTATACTGATTTACAGCTGATAGATGAAGATGAAGAGGAACAAGAAGCACAAGACCTTAAATCCCAAATTACTACTAAATTCAGAAAGTTGAACATGAGTTTCCCTTCAAAGCTAAAAGCTCGGGAAAAGCAGGAACTGGAACTAGAGGCATTTTCTTCCAGAGAACCATATGACAGTTGTACAGAAGTTATTCAAAGTACACCCATAATTGTATCAACCAAGAGGCAGCGAAGATCCAAACCCTGTAATGATGTTGCCATTTTAACTGAGCCGATGAACCGGAAGAAAATTTCTAGAAGGGCAGTGCAACCTGACAAGCATGAAACTGAAGGTGGTGCTATTGTTCCTTATGATAGCAACTTCTCTGAATTACAAAAGAGAAGAAAAGTTTCAAAGTTGCCAATCACCGTGGACATGGAAACAAATTCAGATAGGGTTTCTATGGACAGTGGAAGCCAGTTAGTTCTTCATACTAGCAAGTTGCATTCCTTGGTGGATTCCCATGATGGGACCTCATCTTTGCTGCCTGGTGACTTGAATAGCTTGTCATTGACTGATTTGAGGGCCATGGCAAAGGACCACAAAGTAAAACAGTACTATAAGCTTCGAAAAGGAGCTTTGGTTGAACAATTAGCTAAGCAGTTCAGAAGCTGCTGA 2844 0.2971 MELVFVSVMNVEISKSASIYTAIIWTIQKQFHITSSLISSTAKQVSDDILSSSSTNSEFRVFYCLYHLKKIDGPRTSPVKQGPTRTPGPRRSVGNDHTTLSLAAFIFSCSLFRCNTEHTLTLVIRSFFFFSEFVDNRKTLGTLTRISRTRFPGYSSSYLLQFMAWDLWGSSYAQVASGSNYWSQHPECDFYFGCGRDLIEEDALNVESCVRVLRILITKADTEIEELERDLLFLQNELACAEHEKWPDICRAVLTERINRLDVAVSTLKNDHTDDAEMQPLLDSEPAETLHEILAQSLDMKMLSPIVNLDKDSSTFDSNIIIKGEEKELHGTSESSGSSELLLELHGKRSDNPEKIEELSEKSLVRSPDLGAIIHAPDHSVETKLSETFDNDVTGNEEVRRSQHISTDIGQVLDLFSAKDDENIPNGVKKGNEFVKEKDVSSDDFRPAIGVKGRKEYPHSRLVTSQQRKGEPDHSDWMKLSETSDSKLAGNEEVGRSQLINTDIGQMLDLFSAKDNGNIPSEVKEENEVVKQKDVSSDDFRPAIGIKGREEYPHSRLATSQQKSGPESPDHSDWMKLSETSDNKVAGNDVERSQLNDTDIGQILDVFSAEDNENIPSEAQKENEFVKDVSSDDSRPATDIKVRKKYPNSRLATSPQRKCRNSNLDKKLCDIAPKTARKAYKKQSKVAPDKDLNSMDLPLQVFYPQTFCSANTEFCSFKGSNGIQTKSALYTDLQLIDEDEEEQEAQDLKSQITTKFRKLNMSFPSKLKAREKQELELEAFSSREPYDSCTEVIQSTPIIVSTKRQRRSKPCNDVAILTEPMNRKKISRRAVQPDKHETEGGAIVPYDSNFSELQKRRKVSKLPITVDMETNSDRVSMDSGSQLVLHTSKLHSLVDSHDGTSSLLPGDLNSLSLTDLRAMAKDHKVKQYYKLRKGALVEQLAKQFRSC 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01292 947 SMART Rho_N_2_a 907 945 IPR011112 GO:0006353
Gma19g01292 947 Pfam Rho termination factor, N-terminal domain 907 942 IPR011112 GO:0006353
Gma19g01292 947 Coils Coil 210 244 - -
Gma19g01292 947 MobiDBLite consensus disorder prediction 546 588 - -
Gma19g01292 947 MobiDBLite consensus disorder prediction 613 640 - -
Gma19g01292 947 MobiDBLite consensus disorder prediction 74 94 - -
Gma19g01292 947 MobiDBLite consensus disorder prediction 615 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01292 Gma-Chr19 42109176 42115908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01292 - - gmx:100782404 1527.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01292 19 42109176 42115908 Gma19g01292 19 42109176 42115908 ECH
Gma19g01292 19 42109176 42115908 Gma03g01242 03 38339556 38348186 GST