Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01242 ATGTATATCACCAGCAACATTGATGCTTCCATGCAATTTAAACAGGGGCAGGCAAACCCTTTCGCGTTTCACGGACTCGTTTTTTTTCCAGGATATAGTTACCTGCTGGAGTTCATGGCTTGGGATCTCTGGAGTTCGTCCTATGCCCAAGTTGCGAGTGGTAGTAATTACTGGTCACAGCATCCTGAATGTGACTTCTACTTTGGGTGTGGCCGTGATTTCATAGAGGAGGATGCCTTGAATGTGGAATCCTGTGTTCGGGTTTTAAGAATTTTGATCACCAAGGCAGATACCGAGATTGAGGAACTTGAAAGGGATCTCTTGTTGCTTCAGAATGAATTGGCCTGCACCGAGCATGAAAAGTGGCCTGATATATGCTGTGCTGCTCTCACTGAGAGAATCAGCCGGCTTGATGTGGCGGTTAGCACTTTGAAGAATGATTATGCTGATGATGCAGAGATGCAGCCACTGTTAGATAAAGAACCTGCTGAGACACTTAATGAAATACTTGCCCAGCAGTCTCTGGATATGAATATGTTGAGTCCAATTGTGAATGTTACTGGACATGCACTAGACAAGGATTCTAGCACTTTTGATTCTAATATAATCATTAAGGAGGAAGAAAAAGAACTCCATGGAACCTCTGAAAGCTCGGAACTTCTTTTGGAGCTTCATGAAAAGAGATCAGATAATCCTGAAAAGATTGAGGATTTGCCTGAAAAATCTCTTGTTAGAAGTCCTGATTTAGGAGCTatcatctctgatgagacgaaattatcagaaacatttgataatgaagttactggtaatgaagaagtcagaaaaagccaactcattaatacagatattggtcaaatgttggatttgttttccaccaaagatgatggaaacattccaagtgaagtcaagaaagaaaatgaatttgtcaaagaaaatgatgttagcttagatgattttagacctgcaattggtgtcaaggggaggaaagagtatcctcattccaggttagctacttcacaacaacgaaaaaggggacctgatcactctcattggatgaaattatcagaaacatctgataataaagttgctggaaatgaagaagttggaagaaaccaactcatcaatacagatataggtcaaatcttggatttgttttctgccaaagacaatgaaaatattccaagtgaagtcaagaaagaaagtgagtttgtcaaagaaaaagatgttagctcagatgattttagacctgcaattggcgtcaaggggaggaaagagtatcctcattccagattagctacttcacaacaacaaaaaagtggacctgaatctcctgatcactctgattggatgaaattatcagaaacatctgataaagtttctggaaatgaagttgaaagaagtcaactcattgatacagatataggtcaaatattggatttgttttctgccaaagacaatgaaaatattccaaatgaagccaagAAAGAAAATGAATTTGTCAAAGAAGATGTTAGCTCAGATGATTTTAGACCTGCAACTGACATCAAGGGGAGGAAAAAGTATCCTAATTCCAGATTAGCTACTTCACAACGGAAAAGTAGGAATTCCAATTTAGACAAAAAGGTATGTGATTTTGCTCCAGAAACTGCACAGAGAGCCTACAAGAAACAATCCAAGGTTGCTCCAGATGAAGATTTGAACTCTGTGGATTTACCTTTACAAGTTGTTTATCCTCAAACATTTTGTAGTGCTGATACTGAATTTTGCTCCTTTAAAGGAAGTAATGGGATTCAAACCAAGAGTACACTGAATACTGATTTACAGATGATAGATGAAGATGAAGAGGAACAAGAAGCACAAGACCTTAAGTCCCAAATTACTTCTGAATTCAGAAAATTGAACATGAGTTTCCCTTCAAAGCTAAAAGCTCGGGAAAAGCAGAAACTGGAACTAGAGGCATTTTCTTCCAGAGAACCATATGACAGTTGTACAGAAGTTATTCCAAGTACACCCATAATTGTATCAACCAAGAGGCAGCGAAGATCGAAACCCTGTACTGATGTTGCCATTTTAAATGAGCCCATGAACCGGAAGATTATTACTAGAAGAGCAGTGCAACCCGACAAGCATGAAACTGAAGGTCGTGCTCTTGTTCCTTATGATAGCAACTTCTCTGAATTACAAAAGAGAAGAAAAGCTTTAAAGTTGCCAATCACTGTGGACATGGAAACAAATTCAGACAGGGTTTCTATGGACAGCAGAAGCCAGTTAGTTCTTCATAGTAGCAACTTGCATTCCTTGGTGGATTCCCATGACGGGGCCTCATCTTTGCTGCCTGGTGACTTGAATAGCTTGTCATTGATTGATTTGAGGGCCATGGCAAAGGACCACAAAGTAAAACAGTACTATAAGCTTCGAAAAGGAGCTTTGGTTGAACAATTAGCTAAGCAGCTCAGTAGCTGCTGA 2466 0.2891 MYITSNIDASMQFKQGQANPFAFHGLVFFPGYSYLLEFMAWDLWSSSYAQVASGSNYWSQHPECDFYFGCGRDFIEEDALNVESCVRVLRILITKADTEIEELERDLLLLQNELACTEHEKWPDICCAALTERISRLDVAVSTLKNDYADDAEMQPLLDKEPAETLNEILAQQSLDMNMLSPIVNVTGHALDKDSSTFDSNIIIKEEEKELHGTSESSELLLELHEKRSDNPEKIEDLPEKSLVRSPDLGAIISDETKLSETFDNEVTGNEEVRKSQLINTDIGQMLDLFSTKDDGNIPSEVKKENEFVKENDVSLDDFRPAIGVKGRKEYPHSRLATSQQRKRGPDHSHWMKLSETSDNKVAGNEEVGRNQLINTDIGQILDLFSAKDNENIPSEVKKESEFVKEKDVSSDDFRPAIGVKGRKEYPHSRLATSQQQKSGPESPDHSDWMKLSETSDKVSGNEVERSQLIDTDIGQILDLFSAKDNENIPNEAKKENEFVKEDVSSDDFRPATDIKGRKKYPNSRLATSQRKSRNSNLDKKVCDFAPETAQRAYKKQSKVAPDEDLNSVDLPLQVVYPQTFCSADTEFCSFKGSNGIQTKSTLNTDLQMIDEDEEEQEAQDLKSQITSEFRKLNMSFPSKLKAREKQKLELEAFSSREPYDSCTEVIPSTPIIVSTKRQRRSKPCTDVAILNEPMNRKIITRRAVQPDKHETEGRALVPYDSNFSELQKRRKALKLPITVDMETNSDRVSMDSRSQLVLHSSNLHSLVDSHDGASSLLPGDLNSLSLIDLRAMAKDHKVKQYYKLRKGALVEQLAKQLSSC 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01242 821 MobiDBLite consensus disorder prediction 329 357 - -
Gma03g01242 821 MobiDBLite consensus disorder prediction 429 443 - -
Gma03g01242 821 MobiDBLite consensus disorder prediction 329 355 - -
Gma03g01242 821 Pfam Rho termination factor, N-terminal domain 781 818 IPR011112 GO:0006353
Gma03g01242 821 MobiDBLite consensus disorder prediction 397 428 - -
Gma03g01242 821 SMART Rho_N_2_a 781 820 IPR011112 GO:0006353
Gma03g01242 821 MobiDBLite consensus disorder prediction 397 450 - -
Gma03g01242 821 Coils Coil 86 120 - -
Gma03g01242 821 MobiDBLite consensus disorder prediction 492 521 - -
Gma03g01242 821 MobiDBLite consensus disorder prediction 492 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01242 Gma-Chr3 38339556 38348186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01242 - - gmx:102666817 1485.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01242 03 38339556 38348186 Gma03g01242 03 38339556 38348186 ECH
Gma19g01292 19 42109176 42115908 Gma03g01242 03 38339556 38348186 GST