Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01284 ATGAGAATCTATGATCCAAGCCAACAAGTACTCCAAGCTCTGAGAGGTTCCAACATTGAGTTGCTGCTAGATCTCCCTAACGTCAACCTCCAAAGTGTAGCTTCTAGCCAAGACAACGCAAACAGATGGGTGCAAGACAACGTCAGAAACTATGCCAACAATGTCAGATTCAGGTACATTTCGGTGGGAAATGAAGTAAAACCTTGGGACTCATTTGCACGTTTTGTAGTGCCTGCAATCCAAAACATCCAAAGAGCCGTTTCTGCGGCTGGCCTTGGAAACCAAATAAAAGTTTCCACTGCCATTGAAACTGGTGCCTTGGCAGAATCATACCCTCCATCAAGGGGCTCTTTTAGGTCTGACTATTTAACATCATATCTTGATGGTGTCATTAGACATCTAGTGAACAATAATGCCCCATTATTGGTTAATGTGTACCCTTATTTCGCTTACATTGGAAACCCTAGGGACATTAGTCTTGACTATGCACTTTTTAGGTCTCCTTCAGTGGTAGTGCAAGATGGTTCACTTGGTTACCGTAACCTTTTTAATGCTATGGTGGATGCTGTTTATGCTGCATTGGAGAAAGCAGGAGGAGGGTCACTGAACATAGTTGTGTCTGAGAGTGGATGGCCTTCTTCTGGTGGAACAGCCACTTCACTTGATAATGCAAGAACTTACAACACAAACTTGGTTCGGAATGTGAAACAAGGGACCCCAAAGAGGCCTAATAGACCCCTTGAAACTTATGTGTTTGCCATGTTTGATGAAAATCAGAAGCAACCAGAGTATGAGAAGTTTTGGGGGCTCTTCCTTCCAAATAAACAGCCTAAATACTCAATTAATTTGAATTAG 855 0.4269 MRIYDPSQQVLQALRGSNIELLLDLPNVNLQSVASSQDNANRWVQDNVRNYANNVRFRYISVGNEVKPWDSFARFVVPAIQNIQRAVSAAGLGNQIKVSTAIETGALAESYPPSRGSFRSDYLTSYLDGVIRHLVNNNAPLLVNVYPYFAYIGNPRDISLDYALFRSPSVVVQDGSLGYRNLFNAMVDAVYAALEKAGGGSLNIVVSESGWPSSGGTATSLDNARTYNTNLVRNVKQGTPKRPNRPLETYVFAMFDENQKQPEYEKFWGLFLPNKQPKYSINLN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01284 284 SUPERFAMILY (Trans)glycosidases 1 282 IPR017853 -
Gma19g01284 284 Gene3D Glycosidases 1 284 - -
Gma19g01284 284 ProSitePatterns Glycosyl hydrolases family 17 signature. 202 215 IPR000490 GO:0004553|GO:0005975
Gma19g01284 284 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG3-RELATED 1 281 - -
Gma19g01284 284 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 1 281 IPR044965 GO:0004553|GO:0005975
Gma19g01284 284 Pfam Glycosyl hydrolases family 17 1 282 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01284 Gma-Chr19 41948591 41949445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01284 1 283 Glycoside Hydrolase AT3G57270 62.807 4.75e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01284 - - gmx:100776890 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01284 19 41948591 41949445 Gma19g01284 19 41948591 41949445 ECH
Gma19g01284 19 41948591 41949445 Gma03g01233 03 38210700 38213504 GST