Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01233 ATGGCTCAATCCCATTCTGGAAAAACCTCTTCCATGACTTCAATACTCCTCCTGTTTATGCTTCTTATCAGTAATACAGGCACAACAGGTGCACAATCTGGTGTATGCTATGGAAGAGTTGGCAACAATCTGCCATCGCCACAAGAAGTAGTTTCCCTTTTTAAACAGTACGGCTTTCAAAGGATGAGAATCTATGATCGAAACCATGAAGTACTCCAAGCTCTGAGAGATTCCAACATTGAGTTGCTGCTAGATCTTCCTAACATCGACCTCCAATATGTAGCTTCCAGCCAAGACAACGCAAACAGATGGGTGCAAGACAATGTCAGAAACTTTTGGAATGTCAGATTCAGGTACATTACTGTGGGAAATGAAGTGAAGCCTTGGGACTCATTTGCACAGTTTGTAGTGCCTGCAATGCAAAACATCCAAAGAGCAATTTCTAATGCTGGCCTTGGAAACCAAATCAAAGTTTCCACTGCCATTGAGTCTGGTGCATTGGCAGAATCATACCCTCCATCAAGAGGCTCATTTAGGTCTGATTATAGAACATCATATCTTGATGGTGTCATCAGATTTTTAGTGAACAACAATGCCCCATTATTGGTTAATGTGTACCCTTACTTAGCTTACATTGAAAACCCTAGGGACATTAGTCTTGACTATGCACTCTTTAGGTCTCCTTCGGTGGTAGTGCAAGATGGTTCACTTGGTTACCGTAACCTTTTTGATGCTATGGTTGATGCTGTTTATGCTGCGTTGGAGAAATCTGGAGGATGGTCACTGAACATAGTTGTGTCTGAGAGTGGATGGCCTTCTTCTGGTGGAACTGCAACTTCACTTGATAATGCAAGAACTTACAACACAAACTTGGTTCGGAATGTGAAGCAAGGAACACCAAAAAGGCCTGGTAGACCCCTTGAAACTTATGTGTTTGCCATGTTTGAAGAAAATCAGAAGCAGCCAGAGTATGAGAAGTTTTGGGGGCTCTTCCTTCCAAATAAACAGCTCAAATACTCTATTAATTTGAATTAG 1035 0.4184 MAQSHSGKTSSMTSILLLFMLLISNTGTTGAQSGVCYGRVGNNLPSPQEVVSLFKQYGFQRMRIYDRNHEVLQALRDSNIELLLDLPNIDLQYVASSQDNANRWVQDNVRNFWNVRFRYITVGNEVKPWDSFAQFVVPAMQNIQRAISNAGLGNQIKVSTAIESGALAESYPPSRGSFRSDYRTSYLDGVIRFLVNNNAPLLVNVYPYLAYIENPRDISLDYALFRSPSVVVQDGSLGYRNLFDAMVDAVYAALEKSGGWSLNIVVSESGWPSSGGTATSLDNARTYNTNLVRNVKQGTPKRPGRPLETYVFAMFEENQKQPEYEKFWGLFLPNKQLKYSINLN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01233 344 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 341 IPR044965 GO:0004553|GO:0005975
Gma03g01233 344 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Gma03g01233 344 Gene3D Glycosidases 33 344 - -
Gma03g01233 344 Pfam Glycosyl hydrolases family 17 34 342 IPR000490 GO:0004553|GO:0005975
Gma03g01233 344 SUPERFAMILY (Trans)glycosidases 34 342 IPR017853 -
Gma03g01233 344 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG3-RELATED 23 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01233 Gma-Chr3 38210700 38213504 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01233 25 343 Glycoside Hydrolase AT3G57270 61.801 7.18e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01233 - - gmx:100795474 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01233 03 38210700 38213504 Gma03g01233 03 38210700 38213504 ECH
Gma19g01284 19 41948591 41949445 Gma03g01233 03 38210700 38213504 GST