Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01279 ATGAAGATGAAGCTAGAGGACCCCATTTTCCCTGGTTGTGGAGTCTTCATGCAAGATAAGGATCCTAATTTTCTCGGGTATTACCAACCAAGGAAGGTGAAAATGGAAGAGTTTTCAGATGAGGTTGATGATGGGTTTGATGATGATGATGATGATGAGAAGTTGGAATTGGATGGGTTTACACCTGCTGGAGTTGGGTATGGTAACATAACTGAGGAGTATTTGGAGAGGGTGAAGAAGAAGAAGGTGACCAAAGCTGAGAAGAAGAGGATGGCTAAGGAGGCTGACAAGGAGAAAGAGGAGGTCACCGTGTGTGCTCGGTGCCATTGCTTGAGAAACTATGGCCAGGATAACTCGAAGCGGGCCAAGAAGCTACCGAAGATTGTTCTTGTGGCAACAAAGGTTGATCTCCTTCCGTCGCAGGTTTCTCCTGCGAGTTCAAAGAAGGATTTAGGTGTGAGGAATTTGTTGTCGTTCGTGAAGGATTTGGCTGGTCCTCGTGGGAATGTGTGGGTGATTGGGGCTCAAAATGCAGGGAAGTCTACTCTGATCAATGCATTTGCAAAGAAACAAGGAGCTAAAGTTACAAAGCTCACGGAAGCTCCAATTCCTGGGACAACACTTGGGATCTTGAGAATTGCAGGAGTTTTGCCGGCTAAGACTAAGATGTTTGACACTCCAGGGCTTTTGCACCCATATTTAATGTCAATGAGATTGAACCGGGATGAACAAAAGATGGTTGAGATCCGGAAGGAACTTCGGCCTCGGACATACAGAATTAAGGCAAGGCAGGCTATACAAATTGGTGGCTTGACAAGACTTGACCTTGTTGAAGCCTCTGTTGAAACAATATATGTCATAGTTTGGGCATCAGCAAATGTTTCTCTTCACATGGGGAAAATAGAAAATGCTGATGAGGTTTCGAGAAATCATGTTGGTATCAGACTGCAGGTAAGCCTTTCCTTGTTCTCCTACCTACGGGTGTGCAAAAACCGGTTCGGGGTGTCACTAGCCTTTGATGGAGTTGAAGTAACCTTGAGAGAACCTTTGGTGCTTGACCGGGCACCATCCCTTGAGAAGCCAGGATTTTGGCTACCAAAAGCAATATCTGATGCTATTGGCAACCAAACCAAACTTGAAGCTCAAAGAAGGAAACAACAACTTGAAGATGAGGGTACGGAGTACGTGGGGGCGGGGGCGGGGGCTAAGTTATCTGCATGA 1221 0.4603 MKMKLEDPIFPGCGVFMQDKDPNFLGYYQPRKVKMEEFSDEVDDGFDDDDDDEKLELDGFTPAGVGYGNITEEYLERVKKKKVTKAEKKRMAKEADKEKEEVTVCARCHCLRNYGQDNSKRAKKLPKIVLVATKVDLLPSQVSPASSKKDLGVRNLLSFVKDLAGPRGNVWVIGAQNAGKSTLINAFAKKQGAKVTKLTEAPIPGTTLGILRIAGVLPAKTKMFDTPGLLHPYLMSMRLNRDEQKMVEIRKELRPRTYRIKARQAIQIGGLTRLDLVEASVETIYVIVWASANVSLHMGKIENADEVSRNHVGIRLQVSLSLFSYLRVCKNRFGVSLAFDGVEVTLREPLVLDRAPSLEKPGFWLPKAISDAIGNQTKLEAQRRKQQLEDEGTEYVGAGAGAKLSA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01279 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 240 IPR027417 -
Gma19g01279 406 Coils Coil 81 101 - -
Gma19g01279 406 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 39 116 - -
Gma19g01279 406 Gene3D - 100 232 IPR027417 -
Gma19g01279 406 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 7 36 - -
Gma19g01279 406 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 116 145 - -
Gma19g01279 406 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 338 392 - -
Gma19g01279 406 MobiDBLite consensus disorder prediction 380 406 - -
Gma19g01279 406 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 146 319 - -
Gma19g01279 406 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 7 36 - -
Gma19g01279 406 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 39 116 - -
Gma19g01279 406 Pfam 50S ribosome-binding GTPase 170 243 IPR006073 GO:0005525
Gma19g01279 406 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 116 145 - -
Gma19g01279 406 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 338 392 - -
Gma19g01279 406 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 146 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01279 Gma-Chr19 41882529 41886662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01279 - - gmx:100805561 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01279 19 41882529 41886662 Gma19g01279 19 41882529 41886662 ECH
Gma19g01279 19 41882529 41886662 Gma03g01226 03 38101628 38110861 GST