Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01226 ATGACTATGTTGTTGTCCACAATCATTGTTCCTTCCACCAAGCTCATCATCTTCAACAACAACAACACGCAAGAGCGTGCACTTTCAACTTTTCGTCATTTCTCAGATTCCAGCAAACGCTTCGAGAAAGTGTCGTCCTTTATTGCTTTTGCGGTGAACGGTGGCTCCGCTCATGTTAAAGCTACGCATAGGAGAGATGGTAGTAGAAACCCGCTTATGAGTGAGGGGAGAGATGAAGATGAAGCTAGAGGACCCATTTGCCCTGGTTGTGGAGTCTTCATGCAAGATAAGGACCCTAATTTTCTCGGGTATTACCAACCAAGGAAGATGAAAATGGAAGAGTTTTCAGAAGAGGAGGATGATGATGTGGGGTTTTTGAATGGAAGTGAAAGTGAGCTTGGAGAAGAAAGTGAGGGGTTAATAGATGAGTTAGATTGGGATTCTGATGATTTGGAAGATGAGTTATTGGGTGAAGATGATAATGAGAAGTTGGAATTGGATGGGTTTACACCTGCTGGAGTTGGGTATGGTAACATAACTGAGGAGTATTTGGAGAGGGTGAAGAAGAAGAAGGTTTCCAAAGCTGAGAAGAAGAGGATGGCTAAGGAGGCTGACAAGGAGAAAGAGGAGGCCACCGTGTGTGCCCGGTGCCATTCCTTGAGAAACTATGGCCAGGTGAAGAACCAGACGGTGGAGAATCTCATACCTGATTTTGATTTCGATAGGTTGATTTCGACGCGGCTGATGAACCCTTCTGGGAGTGGCAGTGCTACTGTTGTTGTCATGGTTGTGGACTGTGTTGATTTCGATGGTTCATTCCCTAGAACTGCGGTGAAGTCGTTGTTTCAGGCGTTGGAAAGAATTCAGGATAACTCGAAGAGGTCCAAGAAGCTGCCAAAGCTTGTTCTTGTGGCCACAAAGGTTGATCTCCTTCCGTCGCAGGTTTCTCCTGCAAGGTTGGATAGATGGGTTAGAAACCGTGCAAGATCCGGAGGAGCGCCTAAGTTAAACGGGGTTTATATGGTCAGTTCGAAGAAGGATTTAGGTGTGAGGAATTTGTTGTCATTTGTGAAGGATTTGGCTGGTCCTCGTGGGAATGTGTGGGTGATTGGAGCTCAAAATGCAGGGAAGTCTACTCTGATCAATGCGTTTGCAAAGAAACAAGGAGCTAAAGTTACGAAGCTCACGGAAGCTCCAATTCCTGGCACAACACTTGGGATCTTGAGAATTGCAGGAGTTTTGCCAGCTAAGACTAAGATGTTTGACACTCCAGGGCTCTTGCACCCATATTTAATGTCAATGAGATTGAACCGGGATGAGCAAAAGATGGTTGAGATACGGAAGGAACTTCGGCCTCGGACATACAGAATTAAGGCAAGGCAGGCTATACACATTGGTGGCTTGACAAGACTTGACCTTGTTGAAGCCTCTGTTGAAACAATATATGCCACAGTTTGGGCATCACTAAATGTTTCTCTTCACATGGGGAAAATAGAAAATGCTGATGAGGTTTGGAGAAATCATGTTGGTATCAGACTGCAGGCAAGCCTTTTCTTGTTCTCCTACCAACCTAAATATCCTCCCACTGGTAACGACCGTGCCGCCGAACTAGGAACATGGCAGGAAAGGGAAGTCAAAGTGTCTGGAACCAGTTGGGATGTCAACACCATTGACATAGCAATAGCGGGTTTAGGTTGGTTCTCCTTGTGTCTCAAAGGTGAAGCAACCACAAAACTGTGGGTCTTCCATGGAGTAGAAGTAACCTTGAGAGAACCTTTGGTGCTTGACCGGGCGCCATCACTTGAGAAGCCAGGATTTTGGCTACCAAAAGCAATATCTGATGCTATTGGCAACCAAACCAAACTTGAAGCTCAAAGAAGGAAACAACAACTTGAAGATGAAGGTACGGAATACGTGGGGGCAGGGGCAGAGTTATCTGCATGA 1944 0.4578 MTMLLSTIIVPSTKLIIFNNNNTQERALSTFRHFSDSSKRFEKVSSFIAFAVNGGSAHVKATHRRDGSRNPLMSEGRDEDEARGPICPGCGVFMQDKDPNFLGYYQPRKMKMEEFSEEEDDDVGFLNGSESELGEESEGLIDELDWDSDDLEDELLGEDDNEKLELDGFTPAGVGYGNITEEYLERVKKKKVSKAEKKRMAKEADKEKEEATVCARCHSLRNYGQVKNQTVENLIPDFDFDRLISTRLMNPSGSGSATVVVMVVDCVDFDGSFPRTAVKSLFQALERIQDNSKRSKKLPKLVLVATKVDLLPSQVSPARLDRWVRNRARSGGAPKLNGVYMVSSKKDLGVRNLLSFVKDLAGPRGNVWVIGAQNAGKSTLINAFAKKQGAKVTKLTEAPIPGTTLGILRIAGVLPAKTKMFDTPGLLHPYLMSMRLNRDEQKMVEIRKELRPRTYRIKARQAIHIGGLTRLDLVEASVETIYATVWASLNVSLHMGKIENADEVWRNHVGIRLQASLFLFSYQPKYPPTGNDRAAELGTWQEREVKVSGTSWDVNTIDIAIAGLGWFSLCLKGEATTKLWVFHGVEVTLREPLVLDRAPSLEKPGFWLPKAISDAIGNQTKLEAQRRKQQLEDEGTEYVGAGAELSA 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01226 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 257 476 IPR027417 -
Gma03g01226 647 CDD YqeH 214 426 - -
Gma03g01226 647 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 1 635 - -
Gma03g01226 647 Coils Coil 190 212 - -
Gma03g01226 647 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 1 635 - -
Gma03g01226 647 Pfam 50S ribosome-binding GTPase 367 441 IPR006073 GO:0005525
Gma03g01226 647 MobiDBLite consensus disorder prediction 61 83 - -
Gma03g01226 647 Gene3D - 253 429 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01226 Gma-Chr3 38101628 38110861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01226 - - gmx:100805561 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01226 03 38101628 38110861 Gma03g01226 03 38101628 38110861 ECH
Gma19g01279 19 41882529 41886662 Gma03g01226 03 38101628 38110861 GST