Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01272 ATGGGATCCCAAACACAGTCTCAACTTCATGTGGTGGACTTCACCGACGAAAACATGAAGCCTGGCACCGATGCATGGCTCTCAGCGTGCAGTGTTGTGAGGACTGAACTTGAGAACAATGGTTTTTTCATGGCACGCTATGATAAAGTTGGCAAAGAGCTATGCGACTCTGTTGTATTTGCAGTGGAAGAGTTATTTGGTCTCCCAGTGGAGACAAAAGCGCAAAAGACTAGTGACAAACCTTTCCATGGCTACTTAGGGCAAGTCTCGTGGCTTCCCTTGTATGAATCTGTGGGCATTGATGATCCGTTGACCTTACAAGGGTGTCAAAAATTCGCCCACATAATGTGGCCGGAGGGGAATGGTCGTTTCTGTGAAAGCATCAATGAGTATGCTAAGTTGTTAGGAGAATTAGACCATATGGCGAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGCAACGATGCGATTCTTTCATAGAATCAAACGATTATCTACTTCGATGCATGAAGTATAGAACACCCCAGATGGATGAAAATGATTTGGGACTGCAACCTCACTCGGACTTGACCATCACATCCATTGTACATCAGCTGAATAATCTGAATGGCTTGGAAATCAAACTGAAGGATGGGGAATGGAAAGAGATTGATGCTTCACCTTCCTTGTTTGTGGTTATGGCTGGTGACGCATTCAATGTGTGGAGTAATGGCAGGATACGGCCATGTGAACACAGAGTGACGATGAATGGAAAGAAAAGCAGATACTCTATGGGACTGTTTTCTTTTGGTGGTAATAAGATGATGCGTATACCAGATGAGCTAGTTAATGATCAACATCCCTTGCGTTATAAACCAATATTCGATCATTATGAATACCTTCGTTTCTATGACAAAGAGAAAATCAAAGAGCCTTATTCTCGAATCCAAGCCTACTGTGGAATCTCATCCCTACAATAG 963 0.433 MGSQTQSQLHVVDFTDENMKPGTDAWLSACSVVRTELENNGFFMARYDKVGKELCDSVVFAVEELFGLPVETKAQKTSDKPFHGYLGQVSWLPLYESVGIDDPLTLQGCQKFAHIMWPEGNGRFCESINEYAKLLGELDHMAKRMVFESYGVDMQRCDSFIESNDYLLRCMKYRTPQMDENDLGLQPHSDLTITSIVHQLNNLNGLEIKLKDGEWKEIDASPSLFVVMAGDAFNVWSNGRIRPCEHRVTMNGKKSRYSMGLFSFGGNKMMRIPDELVNDQHPLRYKPIFDHYEYLRFYDKEKIKEPYSRIQAYCGISSLQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01272 320 Gene3D - 1 303 IPR027443 -
Gma19g01272 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
Gma19g01272 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 315 - -
Gma19g01272 320 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 315 - -
Gma19g01272 320 SUPERFAMILY Clavaminate synthase-like 7 302 - -
Gma19g01272 320 Pfam 2OG-Fe(II) oxygenase superfamily 175 263 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01272 Gma-Chr19 41830050 41832260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01272 118 286 Glycosyltransferase AT5G59530 27.011 2.76e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01272 - - gmx:100775440 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01272 19 41830050 41832260 Gma03g01218 03 38046246 38049475 GST