Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01218 ATGGGATCCCAAACACAGTCTCAAGAACTTCATGTGGTGGACTTCACCGACGAAAACACGAAGAAGCCCGGCACCGATGCATGGCTCTCAGCGTGCAGTGTAGTGAGGACTGCACTCGAGGACAACGGTTTTTTCATGGCACGCTATGATAAAGTTGGCAAAGAGCTTTGTGACTCAGTTGTATCTGCGGTGGAAGAGCTATTTGATCTCCCTGTGGAGACAAAAGCGCAAAAGACTAGTGAGAAACTTTTCCATGGCTACTTAGGGCAAGTCTCGTGGCTTCCTTTGTATGAATCTGTGGGCATTGATGATCCGTTGACCTTGCTAGGGTGTCAAAAATTTGGCCACATAATGTGGCCGGAGGGGAATCATCGTTTCTGTGAAAGCATCAATGAGTATTCTAAGTTGTTGGGAGAGTTGGACCATATGGCGAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGCAACGATGCGATTCTTTCATAGAATCAAACGATTATCTACTTCGATGCATGATGTATAGGACACCCCAGACGGGTGAAATTGATTTGGGACTGCAACCTCACTCGGACTTGACCATCACTTCCATTGTACATCAGCTGAATAATCTGAATGGCTTGGAAATCAAACTGAAGGATGGGGAATGGAAAGGGATTGATGCTTCACCCTCTTCGTTTGTAGTTATGGCAGGTGACGCATTCAATGTGTGGAGTAATGGCAGAATACGGCCATGTGAACACAGAGTTACAATGAATGCAAAGAAAACCAGATACTCTATGGGACTGTTTTCTTTTGGTGGTAATAAGGTGATGCGTATACCTGAGGAGCTAGTTAATAAGCAACATCCCTTGCGTTATAAACCACTATTCGACCATTATGAATACCTTCGTTTCTATGACAAAGAGAAAATCAAAGAGCCTTACTCTCGAATCCAAGCCCATTGTGGAATCTCTACCCTACAGTAG 969 0.4458 MGSQTQSQELHVVDFTDENTKKPGTDAWLSACSVVRTALEDNGFFMARYDKVGKELCDSVVSAVEELFDLPVETKAQKTSEKLFHGYLGQVSWLPLYESVGIDDPLTLLGCQKFGHIMWPEGNHRFCESINEYSKLLGELDHMAKRMVFESYGVDMQRCDSFIESNDYLLRCMMYRTPQTGEIDLGLQPHSDLTITSIVHQLNNLNGLEIKLKDGEWKGIDASPSSFVVMAGDAFNVWSNGRIRPCEHRVTMNAKKTRYSMGLFSFGGNKVMRIPEELVNKQHPLRYKPLFDHYEYLRFYDKEKIKEPYSRIQAHCGISTLQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01218 322 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 3 317 - -
Gma03g01218 322 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 317 - -
Gma03g01218 322 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 87 IPR026992 -
Gma03g01218 322 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 267 IPR005123 -
Gma03g01218 322 Gene3D - 2 305 IPR027443 -
Gma03g01218 322 SUPERFAMILY Clavaminate synthase-like 6 304 - -
Gma03g01218 322 Pfam 2OG-Fe(II) oxygenase superfamily 178 265 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01218 Gma-Chr3 38046246 38049475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01218 9 288 Glycosyltransferase AT5G59530 24.476 2.71e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01218 - - gmx:100791791 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01272 19 41830050 41832260 Gma03g01218 03 38046246 38049475 GST