Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01258 ATGCTAAAAAACAGAGGCTATTCCATTCCCTCTCACGAAATCGACCTTTCTCTCTCTGATTTCCACGACATGCATGGTCAATCCCCGGACCCTGATCGCCTTCGCCTCTCCCTCACTCATGCCACCAACTCTTCCAAAAGGATTTTAGTCATATTCTGTGAGCCAGGTGTTGTGAAAGTTACTGCCATTCAGAACATTGCGGGGCAGATTATTAATAGAGACACTTTGACTGGCCTCATGTTGATAGTGGAGAATCATATTACTAGCCAGGCCTTGAAAGCAGTCAATCTTTTCTCCTTCAAGGTTGAAATTTTCCAGATCACAGACTTGCTTGTTAATATTACAAAGCATGTATTGAAGCCAAAGCAGCAGGTGCTGACTGATAAGCAGAAGAAAAATCTCCTGAAGAAGTACAATATCAAAGAAAAGCAGCTTCCCCGCATGCTACTGACAGATGCAATTGCAAGATATTATGGACTCGAGAGGGGGCAAGTAGTTAAGGTTACCTATAGTGGTGAAATCACCCAGATGCATGTTTGGTGA 543 0.4328 MLKNRGYSIPSHEIDLSLSDFHDMHGQSPDPDRLRLSLTHATNSSKRILVIFCEPGVVKVTAIQNIAGQIINRDTLTGLMLIVENHITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKQQVLTDKQKKNLLKKYNIKEKQLPRMLLTDAIARYYGLERGQVVKVTYSGEITQMHVW 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01258 180 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 1 179 - -
Gma19g01258 180 Pfam RNA polymerase Rpb5, C-terminal domain 112 179 IPR000783 GO:0003677|GO:0003899|GO:0006351
Gma19g01258 180 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 1 179 IPR014381 -
Gma19g01258 180 PIRSF RPB5 1 180 IPR014381 -
Gma19g01258 180 Gene3D - 110 179 IPR035913 -
Gma19g01258 180 Pfam RNA polymerase Rpb5, N-terminal domain 1 69 IPR005571 GO:0003677|GO:0003899|GO:0006351
Gma19g01258 180 SUPERFAMILY RPB5-like RNA polymerase subunit 110 178 IPR035913 -
Gma19g01258 180 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 1 113 IPR036710 GO:0003677|GO:0003899|GO:0006351
Gma19g01258 180 Gene3D - 1 109 IPR036710 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01258 Gma-Chr19 41596595 41600557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01258 K03013 - gmx:102670224 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01258 19 41596595 41600557 Gma03g01204 03 37816715 37821531 GST