Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01204 ATGGCAGCAACAGAGATTGGGTTGTTGGAGTGGGTGAGAGTGGGAGGGGAAGAAGAAGAAGCAGAACAAGCAAAAGGGTGTTTGAGCAAGTTCGTCGATAATGGCAGCGTGGAGAGTCACAGATACTACTTGTCTCGCAGAACCACTCTCGAAATGCTCAAAGACAGAGGCTACTCCATTCCCTCTCACGAAATCGACCTTTCTCTCTCCGATTTCCGCGACATGCACGGCCAATTCCCTGACCCTGATCGTCTTCGTCTCTCCCTCACTCATGCCACCAACTCCTCCAAAAGGATTTTAGTCATATTCTGTGGGCCAGGTGTTGTGAAAGTTACTGCCATTCGGAACATTGCGGGGCAGATAATTAATAGAGATACTTTGACTGGCCTCATATTGATAGTGGAGAATCATATTACTAGCCAGGCCTTGAAAGCGGTCAATCTTTTCTCCTTCAAGGTTGAAATTTTCCAGGATCAGTTGACACTAATTTTTTATTATTGA 501 0.4591 MAATEIGLLEWVRVGGEEEEAEQAKGCLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDMHGQFPDPDRLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNIAGQIINRDTLTGLILIVENHITSQALKAVNLFSFKVEIFQDQLTLIFYY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01204 166 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 36 158 IPR036710 GO:0003677|GO:0003899|GO:0006351
Gma03g01204 166 Pfam RNA polymerase Rpb5, N-terminal domain 38 120 IPR005571 GO:0003677|GO:0003899|GO:0006351
Gma03g01204 166 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 18 157 IPR014381 -
Gma03g01204 166 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 18 157 - -
Gma03g01204 166 Gene3D - 33 163 IPR036710 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01204 Gma-Chr3 37816715 37821531 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01204 K03013 - gmx:100306033 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01258 19 41596595 41600557 Gma03g01204 03 37816715 37821531 GST