Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01255 ATGATACCTATGGATACTTTGCTCAAAACACCTAACAAGCTTGAGTTTTTGCACCCCCTTCACGGTTACTCTGAAAAATTTAGCAATTCATGTTCCTCTAGGGTACAAAATCAGGATTTTAGGTTTGGTTCCAAGAAACCAATTGTGAGGTGGGGTAAATGTGGTAATTTGAGGGCTAGTAGCAGTGCCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAGAATCTGGATTTTGAACTTCCTTTGTATGATTCTTCAAAGGGTGCTGTAGTGGACCTTGCTGTTGTGGGAGGAGGTCCTGCAGGGCTTGCTGTTGCACAGCAGGTTTCTGAGGCAGGGCTTTCAGTTTGTGCCATTGATCCAAACCCCAGGCTGATTTGGCCCAATAATTATGGGGTTTGGGTGGATGAGTTTGAGGCCATGGATTTGCTTGATTGCCTTGACACTACTTGGTCCGGCGCGGTCGTCTTCATTGACGACAAAACAAAGAAGGATCTAGACAGGCCTTATGGTAGGGTCAACAGGAAGCTGCTGAAGTCCAAGATGCTGCAGAAATGCATATCAAATGGCGTCAAGTTTCACCAAGCAAAAGTTATCAAGGTTATTCACGAGGAGACCAAATCTTTGCTGATTTGTAATGATGGTGTCACTATTCAGGCCACTGTGGTTCTTGATGCAACTGGCTTTTCAAGATGCCTTGTTCAGTATGATAAACTGTATAATCCGGGGTACCAGGTTGCTTATGGGATTTTGGCCGAGGTTGATGAACACCCGTTTGATGTAGATAAAATGCTTTTCATGGATTGGAGAGATTCTCATCTGAACAATGACATGGAGCTGAAGCAGAGAAATTGTAGGATACCCACCTTTTTGTATGCCATGCCCTTTTCATCCACCAAGATATTTCTTGAAGAAACTTCTCTTGTGGCACGCCCTGGGTTACGAATGGATGATATACAAGAAAGAATGGTTGCAAGGTTGAAACACTTGGGTATTAGAGTGAAAAGCATCGAAGAAGATGAGCAGTGTGTCATTCCCATGGGTGGCCCCCTCCCAGTACTTCCCCAAAGAGTTGTAGGCATTGGCGGTACCGCAGGAATGGTGCATCCTTCGACAGGGAGGCGAAACATCTGCACAAGTGTGGAAAGATTTGTGGCCTATCCAAAGGAGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAGCTGGACTTACCAGGATAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGGTAAAAGATACAGAATAA 1302 0.4447 MIPMDTLLKTPNKLEFLHPLHGYSEKFSNSCSSRVQNQDFRFGSKKPIVRWGKCGNLRASSSALLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEETKSLLICNDGVTIQATVVLDATGFSRCLVQYDKLYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLNNDMELKQRNCRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEQCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGRRNICTSVERFVAYPKEATKGVLLFWYGHLTQAGLTRIEIMAKGTLPLVNMINNLVKDTE 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01255 433 SUPERFAMILY FAD/NAD(P)-binding domain 88 334 IPR036188 -
Gma19g01255 433 Pfam Lycopene cyclase protein 92 373 - -
Gma19g01255 433 TIGRFAM carotene-cycl: lycopene cyclase family protein 92 374 IPR010108 GO:0016117|GO:0016705
Gma19g01255 433 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 374 - -
Gma19g01255 433 Gene3D - 89 374 IPR036188 -
Gma19g01255 433 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01255 Gma-Chr19 41572154 41573677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01255 K06443 - gmx:100810895 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01255 19 41572154 41573677 Gma03g01200 03 37793258 37795228 GST