Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01238 ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCCGTCACAAGGGCTTTCATCATCACTTCGGCGCTTTTCACAATCTTCTTTGGGATCCAAGGCCGTTTCAGCACTCTGGGGTTGTCGTATCAGGATATTTTTGGAAAGCTTCGCCTTTGGAAGTTGATCATTTCCATATTTTCCTTCTCGTCAACACCAGAGTTGATGTTTGGATTGTATCTTCTATATTACTTCAGGGTCTTTGAGAGACAGATAGGTTCCAATAAATACTCAGTCTTTATTGTGTTCTCCATATTAACTTCACTACTGCTTGAGGTCCTTGCTGTAGCACTTTTAAAAGATCCTACAGCAAACCTTGTCACTCCTGGACCATATGGCCTTATATTTGCTTCATTTCTACCCTTTTTCTTTGACATTCCGGTTTCAACACGGTTTCGTGTGTTTAGCTTCCTCTTCTCAGACAAGTCATTCATATATCTAGCTGGTCTTCAGCTTCTTTTGTCGTCATGGAAAAGGTCTATCTTACCAGGAATGTGTGGCATCCTTGCTGGTTCCTTGTACCGTTTGAATGTCTTTTACATCCGCAAAGCAAAGTTCCCAGAGATGATCTCATCATTCTTTTCACGAATTTTGTTGCCATCTATGGGGAGTCCACGTGCACCATCATCAGCAAGGAATGTTAGAAACTACCCTGCTCCAATGCAAGCTGCTGTAGAACCAACAGAGGATTCGATCACTACTCTAGTCTCTATGGGCTTTGACAGGAATTCTGCCAGACAAGCCCTGGTGCAGGCCAGAAACGATGTCAATGTGGCCACCAACATCCTACTGGAGGCACAGTCTCACTAA 843 0.4377 MNGGPSGFTNAPVTRAFIITSALFTIFFGIQGRFSTLGLSYQDIFGKLRLWKLIISIFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILTSLLLEVLAVALLKDPTANLVTPGPYGLIFASFLPFFFDIPVSTRFRVFSFLFSDKSFIYLAGLQLLLSSWKRSILPGMCGILAGSLYRLNVFYIRKAKFPEMISSFFSRILLPSMGSPRAPSSARNVRNYPAPMQAAVEPTEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01238 280 Pfam Rhomboid family 49 189 IPR022764 GO:0004252|GO:0016021
Gma19g01238 280 Gene3D - 212 279 - -
Gma19g01238 280 SUPERFAMILY UBA-like 224 276 IPR009060 GO:0005515
Gma19g01238 280 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 237 277 IPR015940 -
Gma19g01238 280 SMART uba_6 239 276 IPR015940 -
Gma19g01238 280 SUPERFAMILY Rhomboid-like 11 187 IPR035952 -
Gma19g01238 280 Pfam UBA/TS-N domain 240 274 IPR015940 -
Gma19g01238 280 Gene3D - 9 188 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01238 Gma-Chr19 41258882 41276510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01238 K25216 - gmx:100805217 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01238 19 41258882 41276510 Gma19g01238 19 41258882 41276510 ECH
Gma19g01238 19 41258882 41276510 Gma03g01180 03 37452318 37460862 GST