Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01180 ATGAACGGTGGTCCATCTGGTTTCACAAATGCTCCCGTCACAAGGGCCTTCATCATCGCTTCGGCGCTTTTCACAATCTTCTTTGGGATCCAAGGCCGTTTCGGCACTCTGGGGTTGTCGTATCAGGATATTTTTGGAAAGATTCGCCTTTGGAAGTTGATCATGTCCATATTTTCCTTCTCGTCAACACCAGAGTTGATGTTTGGACTGTATCTTCTATATTACTTCAGGGTCTTTGAGCGACAGATAGGTTCCAATAAATACTCAGTCTTTATCGTGTTCTCCATATTAACTTCACTACTGCTTGAGGTCCTTGCTGTAGCACTTTTAAAAGATCCTACAGCAAACCTAGTCACTCCTGGACCATATGGCCTTATATTTGCTTCATTTGTACCCTTTTTCTTTGACATTCCAGTTTCAACACGGTTTCGTGTGTTTAGCTTCCTCTTCTCAGACAAGTCATTCATATATCTAGCTGGTCTTCAGCTTCTTTTGTCATCATGGAAAAGGTCTATCTTACCGGGGATGTGTGGCATCCTTGCTGGTTCCTTGTACCGTTTGAATGTCTTTTACATTCGCAAAGCAAAGTTCCCAGAGATGATCTCATCATTATTTTCAAGAATTTCGTTGCCATCTATGGGGAGTCCACGTGCACCATCATCAGCAAGGAATGTTGTCAGGAATTTACCTTCCTATCCAACTCACCAAATGGAGAGAAACTACCCTGCTCCAATGCAAGCTGCAGTAGAGCCAACGGAGGACTCGATCACTACCCTTGTCTCTATGGGCTTTGACAGGAATTCTGCCAGACAAGCCCTAGTGCAGGCCAGAAATGATGTCAATGTGGCCACCAACATCCTACTGGAGGCACAGTCGCACTAA 882 0.4444 MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFGTLGLSYQDIFGKIRLWKLIMSIFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILTSLLLEVLAVALLKDPTANLVTPGPYGLIFASFVPFFFDIPVSTRFRVFSFLFSDKSFIYLAGLQLLLSSWKRSILPGMCGILAGSLYRLNVFYIRKAKFPEMISSLFSRISLPSMGSPRAPSSARNVVRNLPSYPTHQMERNYPAPMQAAVEPTEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01180 293 Pfam UBA/TS-N domain 253 287 IPR015940 -
Gma03g01180 293 SUPERFAMILY Rhomboid-like 11 187 IPR035952 -
Gma03g01180 293 Gene3D - 220 292 - -
Gma03g01180 293 SUPERFAMILY UBA-like 237 289 IPR009060 GO:0005515
Gma03g01180 293 Gene3D - 9 188 IPR035952 -
Gma03g01180 293 SMART uba_6 252 289 IPR015940 -
Gma03g01180 293 Pfam Rhomboid family 49 189 IPR022764 GO:0004252|GO:0016021
Gma03g01180 293 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 250 290 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01180 Gma-Chr3 37452318 37460862 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01180 K25216 - gmx:100777938 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01180 03 37452318 37460862 Gma03g01180 03 37452318 37460862 ECH
Gma19g01238 19 41258882 41276510 Gma03g01180 03 37452318 37460862 GST