Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01232 ATGATAACGTTGTTGGACTTGTACCACGTTCTGACAGCGGTGGTGCCGCTCTACGTGGCGATGATCCTCGCCTACGGCTCCGTGAAGTGGTGGAAGATCTTCACCCCGGACCAATGCTCGGGAATAAACCGGTTCGTGGCACTCTTCGCAGTGCCCCTCCTCTCCTTCCACTTCATCTCCACCAACAACCCCTACGCCATGAACTACAAGTTCATCGCCGCGGACACACTCCAAAAAGCCATAGTCCTCGCAGTGCTCTTGGTGTGGTCCAGAACAAGCTCAAGAGGCTCACTTGAATGGTCCATAACACTCTTCTCTCTCTCAACTCTCCCCAACACCTTGGTGATGGGTATCCCGTTGCTGAAGGGCATGTACGGTGATGACTCGGGAACACTAATGGTTCAGATTGTGGTGCTTCAGTGTATCATCTGGTATACCCTTATGTTGTTTCTTTTCGAGTATAGGGGTGCGAGGCTTTTAATAGTGGAGCAGTTTCCTGATACAGCGGGTTCGATTATCTCCTTCAAGGTTGATTCGGATATTATTTCGTTGGATGGGAAGGAGCCGCTTCAGACGGAGGCGGAGGTTGGTGATGATGGGAAGCTTCACGTCACGGTGAGAAAGTCGGCGAGTTCGCGGTCGGAGATTTTTTCTAGGCGCTCGCACGGTGGCCTGAACTCGGTGTCGTTGACTCCGAGGCCTTCCAACTTGACCAATGCGGAGATTTACTCGCTGCAGAGCTCCAGGAACCCCACGCCCAGAGGCTCGAGTTTTAACCACACGGATTTTTACTCCATTGTGAATGGTGGTGGTGGGAGGAACAACAACGTGAGTGTGAGTCCGAGGCAGAGTAATTTCGGGGGGTTTGATGAGGAGAGTGGTGGGGGTATGAGGGTGAATGGTGGGTACCCTGGGCCTGCGAATGCGGGGATTTTTTCTCCGGTGGCGAAGAAGAAGGGTGGTGAGAGTGGTGGTGGTGGTGGTGGAGGAGGGAAGGATCTGCACATGTTCGTGTGGAGTTCCAGTGCTTCGCCGGTGTCGGAGGGTGGTATCCATGCCTTTAGAGGTGGTGGGGATTACGGGAGTGACCAGCTTCCCGTTTGTGGGGTGGCTCACCAGAAAGATTATGATGAGTTTGGTCACGATGAGTTTAGCTTCGGGAACAGAACCATTGCTAATGGGGTTGACAAGGAAGGGCCAGTGCTTTCAAAGCTTGGTTCGAGTTCCACGGCTGAGCTTCACCCCAAAGCACAAGGTGAATCCAAACCTACTTCCATGCCACCCACAAGTGTTATGACAAGGCTCATTTTGATCATGGTTTGGAGGAAGCTGATTAGGAACCCCAACACATACTCCAGCCTCTTTGGTCTCACTTGGTCTTTGATCTCATTCAAGTGGAATGTTGTTATGCCAGCAATTGTTGCTAAATCGATATCAATTTTATCTGATGCTGGTCTTGGGATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAGCCAAAGATTATTGCATGTGGAAACTCGGTTGCTTCCTTTGCTATGGCAGTTCGTTTTCTTACTGGTCCTGCAGTCATGGCTGTTGCTTCAATCGTTGTAGGGCTCAGGGGAGTTCTATTGCACATTGCTATTGTACAGGCTGCTCTGCCTCAAGGGATTGTCCCTTTTGTGTTTGCTAAGGAATACAACGTTCATCCTGACATACTAAGCACCGGGGTTATATTTGGGATGCTAATTGCTCTTCCTATTACGCTAGTTTACTACATTTTGCTTGGGCTTTGA 1782 0.5045 MITLLDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADTLQKAIVLAVLLVWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDDSGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDIISLDGKEPLQTEAEVGDDGKLHVTVRKSASSRSEIFSRRSHGGLNSVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSIVNGGGGRNNNVSVSPRQSNFGGFDEESGGGMRVNGGYPGPANAGIFSPVAKKKGGESGGGGGGGGKDLHMFVWSSSASPVSEGGIHAFRGGGDYGSDQLPVCGVAHQKDYDEFGHDEFSFGNRTIANGVDKEGPVLSKLGSSSTAELHPKAQGESKPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVVMPAIVAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01232 593 TIGRFAM 2a69: auxin efflux carrier 1 593 IPR014024 -
Gma19g01232 593 MobiDBLite consensus disorder prediction 406 427 - -
Gma19g01232 593 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 593 - -
Gma19g01232 593 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 593 - -
Gma19g01232 593 Pfam Membrane transport protein 9 588 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01232 Gma-Chr19 41177004 41180199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01232 1 584 Organic Solute Cotransporters AT1G73590 65.000 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01232 K13947 - gmx:100820506 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01232 19 41177004 41180199 Gma19g01232 19 41177004 41180199 ECH
Gma19g01232 19 41177004 41180199 Gma03g01176 03 37391695 37394988 GST