Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01176 ATGATAACTTTGTGGGACTTGTACCACGTTCTGACCGCGGTGGTGCCGCTCTACGTGGCGATGATCCTGGCCTACGGGTCCGTGAAGTGGTGGAAGATCTTCACCCCTGACCAATGCTCCGGCATAAACCGCTTCGTGGCACTCTTCGCAGTCCCACTCCTCTCCTTCCACTTCATCTCCACCAACAACCCTTATGCCATGAACTACAAGTTCATCGCCGCAGACTCGCTCCAGAAAGCCATAGTCCTCGCAGTGCTCTTGGTGTGGTCAAGAACTAGCTCAAGAGGCTCACTTGAATGGTCCATAACACTCTTCTCTCTCTCAACACTCCCCAACACGTTGGTAATGGGTATCCCATTGCTGAAGGGGATGTACGGTGATGCCTCGGGAACACTCATGGTTCAGATTGTGGTGCTTCAGTGTATTATTTGGTACACCCTTATGCTGTTTTTGTTTGAGTATAGGGGCGCGAGGCTTCTTATAGTGGAGCAGTTTCCTGATACTGCGGCTTCGATTATTTCATTCAAGGTTGATTCGGATATTATTTCGTTGGATGGGAAGGAGCCGCTTCAGACGGAGGCGGAGGTTGGTGATGACGGGAAGCTTCATGTGACGGTGAGGAAGTCGGCGAGTTCGCGGTCGGAGATTTTCTCTAGGCGCTCTCATGGCCCCAACTCGGTGTCGTTGACTCCGAGGCCTTCGAATTTGACCAATGCGGAGATTTACTCGCTGCAGAGCTCGAGGAACCCGACTCCGAGAGGCTCGAGTTTTAACCACACGGATTTTTACTCCATGGTGAATGGTAAGAACAACAACAACAACAACAACAACGTGAGTATGAGTCCGAGGCAGAGTAATTTTGGAGGCTTTGATGAAGAAAGTGGTGGGGGTGTGAGGGTGAATGGTGGTGCTGGTGTAGGTGGGTACCCTGGGCCTGCGAATGCGGGGATTTTTTCTCCGGTGGCGGCGAAGAAGAAGGGTGGTGAGAGTGGTGGTGGAGGGAAGGATCTCCACATGTTTGTGTGGAGTTCGAGTGCTTCGCCGGTGTCGGAAGGTGGAATCCATGTCTTCAGAGGTGGTGGTGGGGATTATGGGAGTGACCAGCTTCCTGTTGGTGGGGTGGCTCACCAGAAAGATTATGATGAGTTTGGTCACGATGAGTTTAGCTTCGGGAACAGAACCGTTGCTAATGGGGTTGACAAGGAAGGGCCAGTGCTTTCAAAGCTTGGCTCGAGTTCCACAGCTGAGCTTCGCCCTAAAGCTCAAGGTGAAGCCAAACCTACTTCCATGCCACCAACAAGTGTTATGACAAGGCTCATTTTGATTATGGTTTGGAGGAAGCTGATTAGGAACCCCAACACATATTCCAGCCTCTTTGGTCTCACTTGGTCTTTGATCTCATTCAAATGGAATGTTGTTATGCCAGCAATTGTTGCTAAATCGATATCAATTTTATCTGATGCTGGTCTAGGGATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAGCCAAAGATTATTGCGTGTGGAAACTCGGTTGCTTCCTTTGCTATGGCAGTTCGTTTTCTTACTGGTCCTGCAGTCATGGCTGTTGCTTCAATCGTAGTAGGGCTCAGGGGAGTTCTGTTGCACATTGCTATCGTACAGGCTGCTCTGCCTCAAGGGATTGTTCCTTTTGTGTTTGCTAAGGAATATAACGTTCATCCTGACATACTAAGCACGGGGGTTATATTTGGGATGCTAATTGCTCTTCCTATTACTCTAGTTTACTACATTTTGCTTGGACTTTGA 1794 0.4944 MITLWDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADSLQKAIVLAVLLVWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAASIISFKVDSDIISLDGKEPLQTEAEVGDDGKLHVTVRKSASSRSEIFSRRSHGPNSVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNNNNNNNNVSMSPRQSNFGGFDEESGGGVRVNGGAGVGGYPGPANAGIFSPVAAKKKGGESGGGGKDLHMFVWSSSASPVSEGGIHVFRGGGGDYGSDQLPVGGVAHQKDYDEFGHDEFSFGNRTVANGVDKEGPVLSKLGSSSTAELRPKAQGEAKPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVVMPAIVAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01176 597 Pfam Membrane transport protein 9 592 IPR004776 GO:0016021|GO:0055085
Gma03g01176 597 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 597 - -
Gma03g01176 597 TIGRFAM 2a69: auxin efflux carrier 1 597 IPR014024 -
Gma03g01176 597 MobiDBLite consensus disorder prediction 213 234 - -
Gma03g01176 597 MobiDBLite consensus disorder prediction 402 431 - -
Gma03g01176 597 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01176 Gma-Chr3 37391695 37394988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01176 1 588 Organic Solute Cotransporters AT1G73590 65.156 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01176 K13947 - gmx:100820506 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01176 03 37391695 37394988 Gma03g01176 03 37391695 37394988 ECH
Gma19g01232 19 41177004 41180199 Gma03g01176 03 37391695 37394988 GST