Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01199 ATGGCTTCCTTCCCTCCTCCTGGTTCACTCACTCTCTGCGAAGTCAATCGTGACCTAATCACCGTCGACGCCCTGTCCGACGATCGAGCCAACCAAACCTACGGAAAAATCCTCGGATTGGTGTTCAGTCCCGTCCCGTTTCACAATCTGGAGAACGACGCTTCCGATCAGGAAGGTCCAACAGCGACGGAGACCGCTGCCGGAGAAAGCGTTCAGAGGAAATGTCCGGTGGCACTCTTGCAAGGGCTTGTAAACAACTATCTCGGACGCCTCTTTTACCCTAACGATGTGCATTTGTTGCCGGAGGTTGATCTTCAAGGAGTAAGCTGGCACCCTAATAAGCATATAATTGCTTTTATCTCTGCCCCAACACAAGTTTTAGTTCGTGATTACCAAGAGTCTGAGGGAAAGGATCCAAGTATTTTGACAAATGAGTCGCAGAGAGATGCTAGAGTGCTGGAGTGGAGGCCCAATGGTGGGAAAATGCTTGCTGTGGGTTGCAAGGGTGGAATTTGCATGTGGGCTGCTTCTTATCCTGGAAATGCTGCATCTGTTAGATCTGGAGCTGCTTCCTTTTTAGGAGGTTTGTCTAGAAGCTCAGGGAATCGGTATATCCTGGTCGATTTTCTTCGTAGTCCATATGATGAGCATGTTAGTGCTCTAAGTTGGAGTCCAGATGGAAGATACTTAGCATCTGCTTCATATGAAAGCTCCTCGTTCACTGTATGGGATTTTGCTCAAGGTGTGGGAACACCCATTCGACGTGGATTAGGAGGCATATCTATGCTGAAGTGGTCACCTACTGGAGATTACTTCTTTGCTTCAAAATTTGATGGAACATTTTATCTTTGGGAAACAAACACATGGACATCAGAACAATGGTCATCAACTAGTGGTTTTGTCAAGGGTGCAACATGGGATCCAGATGGGCGTATGATACTTCTTGCATTTTCTGAATCGTCAACTTTGGGATCTATTCACTTTGCATCAAAGCCTCCGTCATTAGATGCACATTTGTTACCTGTTGATTTGCCAGAAATATTATCATTGACAGGCAGTCAGGGAATTGAAAAGATAGCATGGGATAATTCCGGGGAGCGATTGGCTGTGTCTTTTAAAGGTGGAGATGATATGTATAGGGGTCTGATCGCCATATATGATACAAGAAGAACTCCTCTTATATCTACATCATTAATTGGATTTATAAGAGGGCCTGGTGACAAGCCAAAACCAATCTCATTTTCATTTCACGGGAAGTTTAAGCAGGGACCATTGCTTTCTGTGTGCTGGAGCAGTGGGTTTTGTTGCACGTACCCCCTCTTATTTCGTTCTCATATGCTACCATAG 1347 0.4543 MASFPPPGSLTLCEVNRDLITVDALSDDRANQTYGKILGLVFSPVPFHNLENDASDQEGPTATETAAGESVQRKCPVALLQGLVNNYLGRLFYPNDVHLLPEVDLQGVSWHPNKHIIAFISAPTQVLVRDYQESEGKDPSILTNESQRDARVLEWRPNGGKMLAVGCKGGICMWAASYPGNAASVRSGAASFLGGLSRSSGNRYILVDFLRSPYDEHVSALSWSPDGRYLASASYESSSFTVWDFAQGVGTPIRRGLGGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSTSGFVKGATWDPDGRMILLAFSESSTLGSIHFASKPPSLDAHLLPVDLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDDMYRGLIAIYDTRRTPLISTSLIGFIRGPGDKPKPISFSFHGKFKQGPLLSVCWSSGFCCTYPLLFRSHMLP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01199 448 SUPERFAMILY DPP6 N-terminal domain-like 106 419 - -
Gma19g01199 448 SMART WD40_4 203 244 IPR001680 GO:0005515
Gma19g01199 448 SMART WD40_4 343 387 IPR001680 GO:0005515
Gma19g01199 448 SMART WD40_4 246 285 IPR001680 GO:0005515
Gma19g01199 448 SMART WD40_4 135 175 IPR001680 GO:0005515
Gma19g01199 448 Gene3D - 255 437 IPR015943 GO:0005515
Gma19g01199 448 Gene3D - 101 254 IPR015943 GO:0005515
Gma19g01199 448 PANTHER ALADIN/ADRACALIN/AAAS 1 447 IPR045139 -
Gma19g01199 448 Pfam WD domain, G-beta repeat 214 244 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01199 Gma-Chr19 40668669 40674939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01199 K14320 - gmx:100808599 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01199 19 40668669 40674939 Gma19g01199 19 40668669 40674939 ECH
Gma19g01199 19 40668669 40674939 Gma03g01136 03 36590937 36597692 GST