Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01136 ATGGCTTCCTTCCCTCCTCTAGGTTCACTCACTCTCTGcgaagtcaatcgtgacctaatcactGTCGACGCCCTCTCTGACGATCGAGCCAACCAAACCTACGGAAAAATCCTCGGTTTGGTGTTCAGTCCCGTCCCGTTTCACAATCTGGAGAACGACGCTTCCGATCAGGATGGTGCAACGACGACGGCGACAACCGCCGGAGAAAGCGTTCGGAGGAAAAGCCCGGTGGCACTCTTGCAAGGGTTTATGAACAGCTATCTCGGACGCCTCTTTTACCCTGATGATGTGCATTTGTTGCCGGAGGTTGATCTCCAAGGAGTAAGCTGGCACCCTAATAAGCATATAATTGCTTTTATCTCTGCCCCAACACAAGTCTTAGTTCGTGATTACCAAGAGTCTGAGGGGAAGGATCCGAGTATTTTGACAAATGAGTCGCAGAGAGATGCTAGAGTGCTGGAGTGGAGGCCCAATGGTGGGAAAATGCTTGCTGTGGGTTGCAAGGGTGGAATTTGCATGTGGGCTGCTTCTTATCCTGGAAATGCTGCATCTGTTAGATCTGGAGCTGCTTCCTTTTTAGGAGGTTTGTCCAGAAGCTCAGGGAATCGGTATATCCTGGTCGATTTTCTTCGTAGTCCATATGATGAGCATGTTAGTGCTCTCACTTGGACTTCTGCTTCATATGAAAGCTCCTCGTTCTCTGTATGGGATTTTGCTCAAGGTGTGGGAACACCCATTCGACGTGGATTAGGAGGCATATCAATGCTGAAGTGGTCACCTACTGGAGATTACTTCTTTGCTTCAAAATTTGATGGAACATTTTATCTTTGGGAAACAAACACATGGACATCAGAACAATGGTCATCAACTAGTGGTTTTGTCAAGGGTGCAACATGGGATCCAGATGGGCGTATGATACTTCTTGCATTTTCTGAATCGTCAACTTTGGGATCTATTCACTTTGCATCAAAGCCTCCGTCATTAGATGCACATTTGTTACCTGTTGATTTGCCGGAAATATTATCATTGACAGGCAGTCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAACGATTGGCCGTGTCTTTTAAAGGTGGAGAGGATATATACAGGGGTCTGATCGCCGTATATGATACAAGAAGGACTCCTCTTATATCTACATCATTAATAGGATTTATAAGAGGGCCTGGAGACAATCCAAAGCCAATCTCGTTTTTATTTCACGGGAAGTTTAAGCAGGGACCATTGCTTTCTGTGTGCTGGAGCAGCGGGTTTTGTTGCACTTATCCCCTCTTATTTCGCTCTCATATGCTTCCATAA 1326 0.4517 MASFPPLGSLTLCEVNRDLITVDALSDDRANQTYGKILGLVFSPVPFHNLENDASDQDGATTTATTAGESVRRKSPVALLQGFMNSYLGRLFYPDDVHLLPEVDLQGVSWHPNKHIIAFISAPTQVLVRDYQESEGKDPSILTNESQRDARVLEWRPNGGKMLAVGCKGGICMWAASYPGNAASVRSGAASFLGGLSRSSGNRYILVDFLRSPYDEHVSALTWTSASYESSSFSVWDFAQGVGTPIRRGLGGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSTSGFVKGATWDPDGRMILLAFSESSTLGSIHFASKPPSLDAHLLPVDLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGEDIYRGLIAVYDTRRTPLISTSLIGFIRGPGDNPKPISFLFHGKFKQGPLLSVCWSSGFCCTYPLLFRSHMLP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01136 441 Pfam Anaphase-promoting complex subunit 4 WD40 domain 108 186 IPR024977 -
Gma03g01136 441 Gene3D - 101 430 IPR015943 GO:0005515
Gma03g01136 441 SUPERFAMILY DPP6 N-terminal domain-like 105 380 - -
Gma03g01136 441 PANTHER ALADIN/ADRACALIN/AAAS 1 440 IPR045139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01136 Gma-Chr3 36590937 36597692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01136 K14320 - gmx:100781306 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01136 03 36590937 36597692 Gma03g01136 03 36590937 36597692 ECH
Gma19g01199 19 40668669 40674939 Gma03g01136 03 36590937 36597692 GST