Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01195 ATGGCGTATTGTTCTCTCAAGGTTTTGTTTGGTGTTGTGCTCTATGCCTTTGCGTTCCAACATTGCTACGCTGATGCAAACTCAACACTGATTGTAAATGCTGCTTCCAATAATGCAACTGCAAGGCAAATTCCTAACACTTTTCTTGGAGTATTCGTTGAGGAGATTAATCATGCTGGCGCAGGGGGACTGTGGGCTGAACTTGTTATCAATAGAGGCTTTGAAGCTGGAGGCCCAAACAATGCCTTAAATGTTTATAATTGGTCTATTATTGGAGATGAATCATCCATTTCGGTATCAATTAGCCGTACCTCTTGCTTTGAGCGCAATAAAGCTGCATTGCAAATGGAGGTGTATTGTGGTGCTCACAAACCTTGCCCATATGGTGTTGGTATCTCTAACCCTGGTTATTGGGGCATGAATATTGAGCAAGGGAAGAGGTATAAGGTGGTCTATCATGTTAAATCAGAAAGAAAGTTTGATTTTCAACTGTCATTCACGGGTGTTGATGTTATAAAAGTGGCATCTAGTAGAAGACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCAAAAACTACTAATCACTATTCAAGTCTTCAAATAACCACAACAAGAGAAGGGAGTTACTTGTTAGACCAAGTGTCAGTTATGCCATTGGACACTTACATGGGTCATGGCTTCCGAAATGACCTTTTTCAAATGGTGGCAGATTTGAAACCAAAATTTCTCAGATTTCCAGGTGGTTGTTATGTTGAAGGAAATTATCTGAGAAACCGATTTCAATGGAAAGATACTATTGGACCATGGGAGGAGAGACCTGGGCACCTTGGTGATGTTTGGAACTATTGGAGTGATGATGGAATTGGTTTTTTTGAGTATCTCCTGCAGCTAGCAGAGGACCTTGGGGCATTGCCGATATGGGTGTTTAACGCTGGTTTCGGCCTTAATGATGAAATTGATACATCATCCATAGAATCCTATGTGCAAGACGCCCTCGATGGCATTGAATTTGCAAGAGGCTCTCCTACATCACAATGGGGTTCTGTTAGAGCTGCAATGGGACATCCTACCCCATTTGACTTGAGATATGTTGCTGTTGGAAATGAAAATTGTTGGCAAACTTATTTTAATTATCAAGGAAACTACCTTAAGTTCTATGAGGCTATAAAAGCTGCCTACCCAGATATTCAAATTATCTCAAATTGTGATGCTTCCAGAAAACCATTAAATCACCCGGCTGATTTGTTCGATTTTCATACATATCCAAGCTCCAATGACATGTTTTCTCTGTTTACTAAGTTCGACAACACATCACGATCTGGTCCAAAGGCTTTTGTTAGTGAATACGCTGTGAAAAGTGATGCTGCAAACGGAAATCTCTTGGCTGCTGTGGCTGAAGCCGCATTTCTTATTGGACTAGAAAAGAACAGTGATATTGTGGAGATGGTTTCTTATGCACCACTTTTCTTAAATATAAATGACAAGAGATGGATTCCCGATGCAATTGTGTTCGACTCTTATCAGGTTTATGGAACTCCTAGCTATTGGGTGCAGAAACTTTTTATTGAATCCAGTGGAGCAACATTTATTGACTCGACACTCAGTACAACTTCATCTAATAAACTTGCTGCATCTGTAATTATTTGGCAAGATTCTTCAGATAAGAAAAATTACCTAAGAATAAAGGCAGTAAACTTTGGAGCAGCCGCTGAGAGTCTTGACATTGATTTAAGTGGGTTGGACTCAAATGTGCAACAATATGGTTCTACAATAACAGTGCTTACATCAACCAACGTAATGGATGAAAATTCATTCTTGGAGCCGAAGAAGGTGGTGCCACAAACAAGTCCATTGGAGATTGATGACAAACACCTGATTGTTCTTCTCCCTTCCTATTCAGTGATATCATTGGATTTTTTAATATGA 1944 0.3992 MAYCSLKVLFGVVLYAFAFQHCYADANSTLIVNAASNNATARQIPNTFLGVFVEEINHAGAGGLWAELVINRGFEAGGPNNALNVYNWSIIGDESSISVSISRTSCFERNKAALQMEVYCGAHKPCPYGVGISNPGYWGMNIEQGKRYKVVYHVKSERKFDFQLSFTGVDVIKVASSRRHVYGDGKWKRVETIVEAKTTNHYSSLQITTTREGSYLLDQVSVMPLDTYMGHGFRNDLFQMVADLKPKFLRFPGGCYVEGNYLRNRFQWKDTIGPWEERPGHLGDVWNYWSDDGIGFFEYLLQLAEDLGALPIWVFNAGFGLNDEIDTSSIESYVQDALDGIEFARGSPTSQWGSVRAAMGHPTPFDLRYVAVGNENCWQTYFNYQGNYLKFYEAIKAAYPDIQIISNCDASRKPLNHPADLFDFHTYPSSNDMFSLFTKFDNTSRSGPKAFVSEYAVKSDAANGNLLAAVAEAAFLIGLEKNSDIVEMVSYAPLFLNINDKRWIPDAIVFDSYQVYGTPSYWVQKLFIESSGATFIDSTLSTTSSNKLAASVIIWQDSSDKKNYLRIKAVNFGAAAESLDIDLSGLDSNVQQYGSTITVLTSTNVMDENSFLEPKKVVPQTSPLEIDDKHLIVLLPSYSVISLDFLI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01195 647 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 4 647 - -
Gma19g01195 647 Gene3D - 529 645 IPR013780 -
Gma19g01195 647 Pfam Alpha-L-arabinofuranosidase C-terminal domain 454 639 IPR010720 GO:0046373|GO:0046556
Gma19g01195 647 SUPERFAMILY (Trans)glycosidases 205 535 IPR017853 -
Gma19g01195 647 SMART alpha_l_af_c 453 639 IPR010720 GO:0046373|GO:0046556
Gma19g01195 647 Gene3D Glycosidases 220 528 - -
Gma19g01195 647 Gene3D - 74 219 - -
Gma19g01195 647 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 4 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01195 Gma-Chr19 40644128 40650395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01195 1 646 Glycoside Hydrolase AT3G10740 57.315 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01195 K01209 - gmx:100787734 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01195 19 40644128 40650395 Gma19g01195 19 40644128 40650395 ECH
Gma19g01195 19 40644128 40650395 Gma03g01131 03 36554567 36556485 GST