Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01131 ATGCTGGTAGATTTGAAACCAAAATTTCTCAGATTTCCAGGCATTTTTGTTAGTGAATATGCTGTGAAAAGTGATGCAGCAAATGGAAATCTCTTGGCTGCTGTGGCTGAAGCTGCATTTCTTATTGGACTAGAAAAGAACAATGATGTTGTTGAGATGGTTTCTTACGCACCACTTTTCTTAAATATAAATGACAAGAGATGGATTCCCGATGCAATTGTGTTCGACTCTTATCAGGTTTATGGAACTCCTAGCTATTGGGTGCAGAAACTTTTTATTGAATCCAGTGGAGCAACATTTCTTGACTCGACACTCAGTACAAAGTCATCTAATAAACTTGTTGCATCTGCAATATTAATTATTTGGCAAGATTCTTCAGATAAGAAAAATTACCTAAGAATAAAGGTAGTAAACTTTCGAGCAGCCGCTGAGAGTCTTCACATTGATATAAATGGGTTGGACTCAAATGTGTAA 474 0.365 MLVDLKPKFLRFPGIFVSEYAVKSDAANGNLLAAVAEAAFLIGLEKNNDVVEMVSYAPLFLNINDKRWIPDAIVFDSYQVYGTPSYWVQKLFIESSGATFLDSTLSTKSSNKLVASAILIIWQDSSDKKNYLRIKVVNFRAAAESLHIDINGLDSNV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01131 157 Pfam Alpha-L-arabinofuranosidase C-terminal domain 19 140 IPR010720 GO:0046373|GO:0046556
Gma03g01131 157 Gene3D Glycosidases 13 94 - -
Gma03g01131 157 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 13 157 - -
Gma03g01131 157 SUPERFAMILY (Trans)glycosidases 25 100 IPR017853 -
Gma03g01131 157 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 13 157 - -
Gma03g01131 157 SMART alpha_l_af_c 18 155 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01131 Gma-Chr3 36554567 36556485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01131 13 157 Glycoside Hydrolase AT3G10740 62.329 6.13e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01131 K01209 - gmx:100787734 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01131 03 36554567 36556485 Gma03g01131 03 36554567 36556485 ECH
Gma19g01195 19 40644128 40650395 Gma03g01131 03 36554567 36556485 GST