Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01113 ATGGACAGGCTGATAAAAGTAGACCCAACAAACACGGTCCCTATAAGAATCGAGCCAGGCCAAAAATGCCACGGCCAAATAACCCTACGCAACGTGATGTACACCATGCCCGTGGCTTTCAGGCTTCAATCGTTGATCAAAACGCGTTACACGTTGAAGCCACAATCTGGTATCATATCTCCCTTATCCACAGTAACCATAGAAATCCTCTACAATCTTCCACTGGGCTCCACCCTCCCACACTCTTTTCCACACTCCGAAGACTCTTTCCTCCTCCACAGCGTCGTTGTTCCCGGTGCCACCGTGAAAGAACCCTCCTCCATGTTCGAATCTGTACCCTCTGATTGGTTCACCGCGAAGAAGAAACAAGTGTTCATCGACAGCGGCATCAAGATCATCTTCGTGGGCTCGTTGATCCTTGCCCAGTTAGTCCACAACGGGTCCATCGACGAAATCAGAGAAGTGCTGGAACACAGTGAACACACGTGGAAAGCCGTTGACTCCGTTGACCAAAACGGAGACACGCTCCTCCACGTGGCGATCTCCAAAAGCAGACCCGACATAGTGCAGCTCCTCCTGGAGTTCAACGCCGACGTGGAATCAAAAAACCGCACCGGCGAGACTCCGCTGGAATCAGCGTGTGCCTCCGGAGAAGAACTAATCGTTGAGCTTCTCTTAGCTCACAAGGCAAACACAGAGAGAACGGAATCTTCATCTTTAGGAGCGATTCATTTATCAGCAAGAGAAGGACGCAGGGAGGTTTTACGGTTACTGTTGCTGAAAGGGGCTAGCGTTGACTCGTTGACTAAAGACGGTTACACCGCGTTGCACCTTGCGGTTAGAGAAGGTTCAAGAGACTGCGCGAGGCTGTTACTAGCGAACAACGCGAGAACTGATATTAGAGATTCACGAGACGGAGACACGTGTCTGCACGTGGCGGCAGGGGTGGGAGACGAGAGCATGGTGAAGCTGTTGTTGAACAAGGGTGCTAACAAGGACGTGAGGAACTTTAACGGTAAGACTGCGTATGATGTTGCGGCGGAGAAGGGGCACGCGCGCGTGTTCGACGCGCTGCGGCTGGGGGATGGGTTGTGCGTGGCGGCGAGGAAGGGGGAGGTGAGGAGCATCCAGAGGCTGATAGAGGGGGGAGCGGTGGTGGACGGGAGGGACCAGCACGGGTGGACGGCGTTGCACAGGGCGTGTTTTAAGGGGCGCGTGGAGGCGGTGAGGGCGTTGCTGGAGAGAGGGATTGATGTGGAGGCGAGGGATGAGGATGGGTATACGGCGCTGCATTGCGCGGTGGAGGCGGGGCATGCTGACGTGGCGGAGGTGCTGGTGAAGAGGGGTGTGGATGTGGAGGCCAGGACGAATAAGGGTGTGACGGCTTTGCAGATCGCGGAGGCGTTGGGGTATGGTGGGATTGCGAGGCTGCTTGGTGCTGCTGCGGGACACGTGGCGGAAGGAGAACAACAATCTGTGCTTGGGGAGATGAAGAAGGAAAAGAAAAACAAGCTTGGAAGAAGAAGAAGGGAGAGGGAGATTCGGGGGAGCTTTGACCGGTCAATGCCTTTGCCTGTCCTCTAG 1584 0.5505 MDRLIKVDPTNTVPIRIEPGQKCHGQITLRNVMYTMPVAFRLQSLIKTRYTLKPQSGIISPLSTVTIEILYNLPLGSTLPHSFPHSEDSFLLHSVVVPGATVKEPSSMFESVPSDWFTAKKKQVFIDSGIKIIFVGSLILAQLVHNGSIDEIREVLEHSEHTWKAVDSVDQNGDTLLHVAISKSRPDIVQLLLEFNADVESKNRTGETPLESACASGEELIVELLLAHKANTERTESSSLGAIHLSAREGRREVLRLLLLKGASVDSLTKDGYTALHLAVREGSRDCARLLLANNARTDIRDSRDGDTCLHVAAGVGDESMVKLLLNKGANKDVRNFNGKTAYDVAAEKGHARVFDALRLGDGLCVAARKGEVRSIQRLIEGGAVVDGRDQHGWTALHRACFKGRVEAVRALLERGIDVEARDEDGYTALHCAVEAGHADVAEVLVKRGVDVEARTNKGVTALQIAEALGYGGIARLLGAAAGHVAEGEQQSVLGEMKKEKKNKLGRRRREREIRGSFDRSMPLPVL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01113 527 ProSiteProfiles Ankyrin repeat region circular profile. 425 457 - -
Gma19g01113 527 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Gma19g01113 527 ProSiteProfiles Ankyrin repeat profile. 238 270 IPR002110 GO:0005515
Gma19g01113 527 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Gma19g01113 527 Pfam MSP (Major sperm protein) domain 5 108 IPR000535 -
Gma19g01113 527 ProSiteProfiles Ankyrin repeat profile. 205 237 IPR002110 GO:0005515
Gma19g01113 527 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Gma19g01113 527 Gene3D - 238 305 IPR036770 -
Gma19g01113 527 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 527 - -
Gma19g01113 527 Pfam Ankyrin repeats (many copies) 394 446 IPR002110 GO:0005515
Gma19g01113 527 Gene3D Immunoglobulins 1 125 IPR013783 -
Gma19g01113 527 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Gma19g01113 527 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Gma19g01113 527 PRINTS Ankyrin repeat signature 272 287 IPR002110 GO:0005515
Gma19g01113 527 PRINTS Ankyrin repeat signature 321 335 IPR002110 GO:0005515
Gma19g01113 527 Gene3D - 359 426 IPR036770 -
Gma19g01113 527 Pfam Ankyrin repeat 172 199 IPR002110 GO:0005515
Gma19g01113 527 Pfam Ankyrin repeats (many copies) 305 346 IPR002110 GO:0005515
Gma19g01113 527 ProSiteProfiles Ankyrin repeat region circular profile. 305 336 - -
Gma19g01113 527 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 527 - -
Gma19g01113 527 MobiDBLite consensus disorder prediction 499 527 - -
Gma19g01113 527 ProSiteProfiles Ankyrin repeat region circular profile. 205 231 - -
Gma19g01113 527 Pfam Ankyrin repeats (3 copies) 211 302 IPR002110 GO:0005515
Gma19g01113 527 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
Gma19g01113 527 Gene3D - 427 485 IPR036770 -
Gma19g01113 527 Gene3D - 306 358 IPR036770 -
Gma19g01113 527 Gene3D - 132 237 IPR036770 -
Gma19g01113 527 SMART ANK_2a 425 454 IPR002110 GO:0005515
Gma19g01113 527 SMART ANK_2a 305 334 IPR002110 GO:0005515
Gma19g01113 527 SMART ANK_2a 172 201 IPR002110 GO:0005515
Gma19g01113 527 SMART ANK_2a 271 302 IPR002110 GO:0005515
Gma19g01113 527 SMART ANK_2a 392 421 IPR002110 GO:0005515
Gma19g01113 527 SMART ANK_2a 338 367 IPR002110 GO:0005515
Gma19g01113 527 SMART ANK_2a 205 234 IPR002110 GO:0005515
Gma19g01113 527 SMART ANK_2a 238 267 IPR002110 GO:0005515
Gma19g01113 527 ProSiteProfiles Ankyrin repeat region circular profile. 238 266 - -
Gma19g01113 527 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Gma19g01113 527 SUPERFAMILY PapD-like 2 149 IPR008962 -
Gma19g01113 527 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
Gma19g01113 527 ProSiteProfiles Ankyrin repeat region circular profile. 172 204 - -
Gma19g01113 527 SUPERFAMILY Ankyrin repeat 166 486 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01113 Gma-Chr19 39347740 39349323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01113 266 483 Miscellaneous Gene Families AT2G31820 30.081 2.47e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01113 - - gmx:100782232 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01113 19 39347740 39349323 Gma16g00348 16 3626078 3627789 GST