Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01112 ATGGCATCTCACATCGTTGGATACCCCCGCATGGGTCCCAAGAGAGAGCTCAAGTTCGCTCTCGAGTCTTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAGAAGGTGGCTGCTGATCTCAGGTCATCCATCTGGAAGCAGATGGCTGGTGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCGTTCTATGACCAGCTGCTCGACGCCACCGCCACCCTCGGTGCCGTCCCCCCCAGGTACGGCTGGACCGGCGGCGAGATTGGATTCGACACCTACTTCTCCATGGCCAGAGGTAATGCTACCGTGCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATTGTCCCTGAATTGGGCCCTGATGTGAACTTCACCTATGCTTCTCACAAGGCTGTTGATGAATACAAGGAGGCCAAGGCGCTTGGAGTGGATACCATTCCCGTACTCGTTGGCCCTGTTACATACTTGTTGCTCTCCAAGCCTGCCAAGGGAGTCGAGAAATCCTTTTCTCTCCTCTCTCTCCTTCCCAAGGTTCTTGCTGTCTACAAGGAAGTTATTGCTGACCTTAAGGCAGCTGGTGCTTCATGGATTCAATTTGATGAGCCTACCCTTGTCTTGGACCTTGAATCTCACAAGTTGCAAGCTTTCACTGACGCATATGCAGAACTTGCACCTGCTTTGTCTGATCTGAATGTTCTTGTTGAGACCTACTTTGCTGACATCCCTGCTGAGGCGTACAAGACCCTCACATCTCTGAATGGCGTCACTGCATATGGGTTTGATTTGGTCCGTGGAACCCATACTCTTGATTTGATCAAGGGTGGATTTCCCAGTGGAAAATACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCCAATGACCTTGCTGCTTCTCTCACTACATTGCAGGGTCTTGAGGGCATTGTGGGCAAAGATAAGCTTGTTGTGTCCACCTCCTCCTCCCTTCTTCACACTGCTGTTGATCTTGTTAACGAGACCAAGTTGGATGACGAGATCAAGTCATGGCTAGCATTTGCTGCACAAAAAATTGTTGAAGTTAACGCATTGGCTAAGGCATTGTCTGGCAACAAGGATGTGGCCTTCTTCTCTGCTAATGCTGCAGCTCAGGCTTCAAGGAAGTCCTCTCCAAGAGTGACCAACGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCAGATCATCGCCGTGCAACAAATGTCAGTGCCAGACTGGATGCTCAACAAAAGAAGCTCAACCTTCCAATCCTTCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAACTGAGGAGGGTACGCCGTGAGTTCAAGGCTAACAAGATCTCCGAGGAAGAGTATGTTAAGTCAATTAAGGAGGAAATTCGCAAAGTTGTTGAACTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGAGAAATGATATGGTTGAGTACTTCGGTGAGCAATTGTCAGGCTTTGCCTTCACTGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACTGTCTTCTGGTCATCTCTGGCTCAGAGCTTTACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCTGTTACCATTCTCAACTGGTCCTTTGTTAGAAATGACCAACCTAGATCTGAGACCACCTACCAGATTGCTTTGGCTATCAAGGACGAAGTGGAGGACCTTGAAAAGGCTGGCATCACTGTTATCCAAATTGATGAAGCTGCTTTGAGAGAGGGTCTGCCACTGAGGAAATCAGAACAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAATCACCAATGTTGGTGTGCAGGATACCACTCAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATCATCCACTCCATCATCGACATGGACGCTGATGTTATCACCATTGAGAACTCTCGCTCCGATGAGAAGCTCCTGTCAGTCTTCCGTGAAGGTGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTCTATGACATCCACTCCCCAAGAATACCACCAACTGAAGAAATCGCTGACAGAATCAATAAGATGCTTGCAGTGCTCGAGAAGAACATCTTGTGGGTCAACCCTGACTGTGGTCTCAAGACCCGCAAGTACACTGAAGTGAAGCCAGCCCTCACAAACATGGTTGCCGCAGCAAAACTCATCCGTAACGAACTTGCCAAGTGA 2292 0.4935 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVAADLRSSIWKQMAGAGIKYIPSNTFSFYDQLLDATATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPDVNFTYASHKAVDEYKEAKALGVDTIPVLVGPVTYLLLSKPAKGVEKSFSLLSLLPKVLAVYKEVIADLKAAGASWIQFDEPTLVLDLESHKLQAFTDAYAELAPALSDLNVLVETYFADIPAEAYKTLTSLNGVTAYGFDLVRGTHTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLTTLQGLEGIVGKDKLVVSTSSSLLHTAVDLVNETKLDDEIKSWLAFAAQKIVEVNALAKALSGNKDVAFFSANAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKANKISEEEYVKSIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSLAQSFTKRPMKGMLTGPVTILNWSFVRNDQPRSETTYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQAHYLDWAVHAFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELAK 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01112 763 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 760 IPR006276 GO:0003871|GO:0008270|GO:0009086
Gma19g01112 763 CDD CIMS_N_terminal_like 3 367 - -
Gma19g01112 763 Gene3D - 5 525 IPR038071 -
Gma19g01112 763 TIGRFAM met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 759 IPR006276 GO:0003871|GO:0008270|GO:0009086
Gma19g01112 763 SUPERFAMILY UROD/MetE-like 3 395 IPR038071 -
Gma19g01112 763 PIRSF Met_synth_MetE 1 763 IPR006276 GO:0003871|GO:0008270|GO:0009086
Gma19g01112 763 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 1 763 - -
Gma19g01112 763 PANTHER COBALAMIN-INDEPENDENT METHIONINE SYNTHASE 1 763 - -
Gma19g01112 763 CDD CIMS_C_terminal_like 433 756 IPR002629 GO:0003871|GO:0008270|GO:0009086
Gma19g01112 763 Gene3D - 390 758 IPR038071 -
Gma19g01112 763 SUPERFAMILY UROD/MetE-like 397 759 IPR038071 -
Gma19g01112 763 Coils Coil 460 480 - -
Gma19g01112 763 Pfam Cobalamin-independent synthase, Catalytic domain 432 755 IPR002629 GO:0003871|GO:0008270|GO:0009086
Gma19g01112 763 Pfam Cobalamin-independent synthase, N-terminal domain 3 315 IPR013215 GO:0003871|GO:0008270|GO:0008652
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01112 Gma-Chr19 39306817 39310600 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01112 K00549 - gmx:100802039 1495.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01112 19 39306817 39310600 Gma19g01112 19 39306817 39310600 ECH
Gma19g01112 19 39306817 39310600 Gma16g00349 16 3649526 3655217 GST
Gma19g01112 19 39306817 39310600 Gma05g00806 05 15155851 15159740 PCT
Gma05g00806 05 15155851 15159740 Gma19g01112 19 39306817 39310600 PCT