Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00806 ATGGCTTCTCATATTGTTGGATACCCCCGCATGGGCCCCAAGAGAGAGCTGAAGTTTGCTCTGGAGTCATTCTGGGAAGGAAAGAGCAGTGCCGATGATTTGCAGAAGGTGGCTGCTGATCTCAGGGCATCCATCTGGAAGCAGATGACTGATGCTGGAATCAAGTATATCCCCAGCAACACTTTCTCGTACTATGATCAAATGCTTGATACTACCGCCATGCTTGGTGCTGTTCCACCCAGATATGGGTTGAACAATGGGGAGATAGAATTCGATACCTACTTCTCCATGGCCAGAGGTAATGCCTCTGTGCCTGCCATGGAGATGACGAAGTGGTTTGACACCAACTACCACTTTATTGTCCCCGAATTGGGACCTGATGTGAATTTCACTTATGCTTCCCACAAGGCAGTGAATGAGTACAAGGAGGCCAAGGCGCTTGGAGTAGATACAGTTCCAGTCCTCATTGGCCCTGTATCATATTTGGTTCTCTCCAAACCTGCCAAGGGTGTTGATAAATCCTTTTGTCTTCTTTCTCTCCTCCCAAAAGTCCTTGCTATCTATAAGGAAGTTGTGGCTGATCTTAAGGAAGCTGGTGCTTCGTGGGTTCAATTCGATGAACCTATCTTTGTCTTAGACCTTGACTCTCAAACGTTGCAAGCATTTTCTACAGCATACGCAGAACTTGAATCTACTTTATCTGGCTTAAACGTTCTTATTGAGACCTACTTTGCTGACATTACCGCGGAGGCATACCAGACCCTCACAGCTCTTAATGGAGTCACAGCATTTGGATTCGATTTAGTCCGTGGAACCAAGACTCTTGATCTAATCAAGGGTGGATTTCCCAGTGGAAAATACATGTTTGCTGGAGTGGTGGATGGAAGAAACATTTGGGCTAACAATCTTGCTGCTTCTCTCGATACATTAAATAGTCTTGAGGGCATTGTGGGAAAAGATAAACTTGTCGTGTCTACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGACCAAGTTGGATAATGAGATAAAATCATGGCTGGCTTTTGCTGCCCAAAAAATTGTTGAAGTAAATGCATTGGCCAAGGCATTGTCTGGTCAAAAGGATGAGGCCTTTTTCTCTTCTAATGCTGCTGCTCAAGCTTCAAGAAAGTCCTCTCCAAGAGTGACTAATGAGGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCTGATCATCGTCGTGCCACAAATGTCAGTGCTAGATTGGATGCTCAACAAAAGAAGTTCAACCTTCCAATCCTCCCAACCACCACAATTGGATCCTTCCCTCAGACTGTTGAACTGAGGAGGGTGCGTCGTGAATACAAGGCTAACAAGATCTCAGAGGAGGAGTATGTTAGTTCAATTAAAGAGGAAATCCGCAAAGTTGTTGAACTCCAAGAGAATCTTGATATCGATGTCCTGGTACACGGGGAGCCTGAGAGGAATGACATGGTGGAGTACTTTGGTGAGCAGTTGTCAGGCTTTGCCTTTACCGTTAATGGCTGGGTGCAATCTTATGGATCTCGTTGTGTGAAGCCGCCAATCATCTATGGTGATGTGAGCCGCCCCAAGCCAATGACTGTCTTCTGGTCATCCACTGCTCAGAGCATGACCAAACGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTTCGAAATGACCAACCTAGGTACGTACAAACAAACTCAAGAGCTCAGAAAGAGAATATGGTTATTTCTAACATGGTGTTAACCCCCATCTACAGGTCTGAGACCACCTATCAGATTGCTTTGGCTATCAAGGATGAAGTAGAAGATCTTGAAAAGGCTGGTATTACTGTTATCCAAATTGATGAGGCTGCTTTGAGGGAGGGGCTACCATTGAGAAAGTCAGAGCAAGCTAACTACTTGGACTGGGCTGTCCATTCCTTCAGGATCACCAATATTGGTGTGCAGGATACAACTCAGATCCACACCCACATGTGCTATTCTAACTTCAATGACATCATCCACTCAATCATTGATATGGATGCTGATGTGATTACCATTGAGAACTCTCGCTCTGATGAAAAGCTCCTGTCAGTGTTCCGTGATGGAGTTAAATATGGAGCCGGAATTGGCCCTGGAGTGTATGACATTCACTCCCCAAGAATACCACCAACTGATGAAATTGCTGATAGGATCAATAAGATGCTTGCAGTGCTTGAGAAAAACATTTTGTGGGTCAACCCTGATTGTGGGCTCAAGACTCGCAAATACCCTGAGGTGAATCCGGCCCTCACAAACATGGTTGCTGCCACAAAACTCATCCGTAACCAGCTTGCCAGTGGCAAGTGA 2373 0.4564 MASHIVGYPRMGPKRELKFALESFWEGKSSADDLQKVAADLRASIWKQMTDAGIKYIPSNTFSYYDQMLDTTAMLGAVPPRYGLNNGEIEFDTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFTYASHKAVNEYKEAKALGVDTVPVLIGPVSYLVLSKPAKGVDKSFCLLSLLPKVLAIYKEVVADLKEAGASWVQFDEPIFVLDLDSQTLQAFSTAYAELESTLSGLNVLIETYFADITAEAYQTLTALNGVTAFGFDLVRGTKTLDLIKGGFPSGKYMFAGVVDGRNIWANNLAASLDTLNSLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDNEIKSWLAFAAQKIVEVNALAKALSGQKDEAFFSSNAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKFNLPILPTTTIGSFPQTVELRRVRREYKANKISEEEYVSSIKEEIRKVVELQENLDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRYVQTNSRAQKENMVISNMVLTPIYRSETTYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQANYLDWAVHSFRITNIGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRDGVKYGAGIGPGVYDIHSPRIPPTDEIADRINKMLAVLEKNILWVNPDCGLKTRKYPEVNPALTNMVAATKLIRNQLASGK 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00806 790 Pfam Cobalamin-independent synthase, Catalytic domain 432 579 IPR002629 GO:0003871|GO:0008270|GO:0009086
Gma05g00806 790 Pfam Cobalamin-independent synthase, Catalytic domain 595 780 IPR002629 GO:0003871|GO:0008270|GO:0009086
Gma05g00806 790 PANTHER COBALAMIN-INDEPENDENT METHIONINE SYNTHASE 1 580 - -
Gma05g00806 790 PANTHER COBALAMIN-INDEPENDENT METHIONINE SYNTHASE 600 790 - -
Gma05g00806 790 CDD CIMS_N_terminal_like 3 367 - -
Gma05g00806 790 Pfam Cobalamin-independent synthase, N-terminal domain 3 315 IPR013215 GO:0003871|GO:0008270|GO:0008652
Gma05g00806 790 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 785 IPR006276 GO:0003871|GO:0008270|GO:0009086
Gma05g00806 790 SUPERFAMILY UROD/MetE-like 3 395 IPR038071 -
Gma05g00806 790 SUPERFAMILY UROD/MetE-like 397 785 IPR038071 -
Gma05g00806 790 Gene3D - 5 525 IPR038071 -
Gma05g00806 790 Gene3D - 599 783 IPR038071 -
Gma05g00806 790 Gene3D - 390 581 IPR038071 -
Gma05g00806 790 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 600 790 - -
Gma05g00806 790 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 1 580 - -
Gma05g00806 790 CDD CIMS_C_terminal_like 433 781 IPR002629 GO:0003871|GO:0008270|GO:0009086
Gma05g00806 790 PIRSF Met_synth_MetE 1 585 IPR006276 GO:0003871|GO:0008270|GO:0009086
Gma05g00806 790 PIRSF Met_synth_MetE 589 790 IPR006276 GO:0003871|GO:0008270|GO:0009086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00806 Gma-Chr5 15155851 15159740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00806 K00549 - gmx:100811317 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01112 19 39306817 39310600 Gma05g00806 05 15155851 15159740 PCT
Gma16g00349 16 3649526 3655217 Gma05g00806 05 15155851 15159740 PCT
Gma05g00806 05 15155851 15159740 Gma19g01112 19 39306817 39310600 PCT
Gma05g00806 05 15155851 15159740 Gma16g00349 16 3649526 3655217 PCT